Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01747 and RBAM_010500
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:27
# Commandline: needle
# -asequence dna-align/BSNT_01747___aprN.1.9828.seq
# -bsequence dna-align/RBAM_010500___aprE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01747___aprN-RBAM_010500___aprE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01747___aprN-RBAM_010500___aprE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01747___aprN
# 2: RBAM_010500___aprE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1166
# Identity: 929/1166 (79.7%)
# Similarity: 929/1166 (79.7%)
# Gaps: 37/1166 ( 3.2%)
# Score: 3712.5
#
#
#=======================================
BSNT_01747___ 1 GTGAGAAGCAAAAAATTGTGGATCAGCTTGTTGTTTGCGTTAACGTTAAT 50
||||||.|||||||..|.||||||||.|||.|||||||.|||.|||||||
RBAM_010500__ 1 GTGAGAGGCAAAAAGGTATGGATCAGTTTGCTGTTTGCTTTAGCGTTAAT 50
BSNT_01747___ 51 CTTTACGATGGCGTTCAGCAACATGT---CTGCGCAGGCTGCCGGAAA-- 95
||||||||||||||||.|||.||.|| ||||.|||||.||.||.||
RBAM_010500__ 51 CTTTACGATGGCGTTCGGCAGCACGTCTCCTGCCCAGGCGGCAGGGAAAT 100
BSNT_01747___ 96 -AAGCAGTACAGAAAAGAAATACATTGTCGGATTTAAGCAGACAATGAGT 144
||.|.| .||||||||||||||||||||||||||.|||||||||||.
RBAM_010500__ 101 CAAACGG---GGAAAAGAAATACATTGTCGGATTTAAACAGACAATGAGC 147
BSNT_01747___ 145 GCCATGAGTTCCGCCAAGAAAAAGGATGTTATTTCTGAAAAAGGCGGAAA 194
.|.|||||..||||.||||||||.|||||.|||||||||||||||||.||
RBAM_010500__ 148 ACGATGAGCGCCGCTAAGAAAAAAGATGTCATTTCTGAAAAAGGCGGGAA 197
BSNT_01747___ 195 GGTTCAAAAGCAATTTAAGTATGTTAACGCGGCCGCAGCAACATTGGATG 244
.||.|||||||||||.||.|||||..||||.||..||||.|||||..|||
RBAM_010500__ 198 AGTGCAAAAGCAATTCAAATATGTAGACGCAGCTTCAGCTACATTAAATG 247
BSNT_01747___ 245 AAAAAGCTGTAAAAGAATTGAAAAAAGATCCGAGCGTTGCATATGTGGAA 294
||||||||||||||||..||||||||||.||.|||||.||.||.||.|||
RBAM_010500__ 248 AAAAAGCTGTAAAAGAGCTGAAAAAAGACCCTAGCGTCGCTTACGTTGAA 297
BSNT_01747___ 295 GAAGATCATATTGCACATGAATATGCGCAATCTGTTCCTTATGGCATTTC 344
||||||||..|||||.|.|..||.|||||.||.||.|||||.|||.|.||
RBAM_010500__ 298 GAAGATCACGTTGCAAAAGCGTACGCGCAGTCCGTGCCTTACGGCGTATC 347
BSNT_01747___ 345 TCAAATTAAAGCGCCGGCTCTTCACTCTCAAGGCTACACAGGCTCTAACG 394
.|||||||||||.||.|||||.|||||||||||||.|||.||.||.||.|
RBAM_010500__ 348 ACAAATTAAAGCCCCTGCTCTGCACTCTCAAGGCTTCACCGGATCAAATG 397
BSNT_01747___ 395 TAAAAGTAGCTGTTATCGACAGCGGAATTGACTCTTCTCATCCTGACTTA 444
|.||||||||.||||||||||||||.||.||.||||||||||||||.|||
RBAM_010500__ 398 TGAAAGTAGCGGTTATCGACAGCGGTATCGATTCTTCTCATCCTGATTTA 447
BSNT_01747___ 445 AACGTCAG-AGGCGGAGCAAGCTTCGTTCCTTCTGAAACAAACCCATACC 493
||.|| || |||||||||.|||.|.|||||||||||||||||.||.|.||
RBAM_010500__ 448 AAAGT-AGCAGGCGGAGCCAGCATGGTTCCTTCTGAAACAAATCCTTTCC 496
BSNT_01747___ 494 AGGACGGCAGTTCTCACGGTACGCATGTCGCCGGTACGATTGCCGCTCTT 543
|.|||..||..||||||||.||.||.||.||||||||..||||.||||||
RBAM_010500__ 497 AAGACTACAACTCTCACGGAACTCACGTTGCCGGTACAGTTGCGGCTCTT 546
BSNT_01747___ 544 AATAACTCAATCGGTGTTCTGGGCGTAGCGCCAAGCGCATCATTATATGC 593
|||||||||.|||||||..|.|||||.||||||||||||||..|.||.||
RBAM_010500__ 547 AATAACTCAGTCGGTGTATTAGGCGTTGCGCCAAGCGCATCTCTTTACGC 596
BSNT_01747___ 594 AGTAAAAGTGCT------TGA---TTCAACAGGAAGCGGCCAATATAGCT 634
.||||||||.|| ||| ||| ||||||.||.||||
RBAM_010500__ 597 TGTAAAAGTTCTCGGCGCTGACGGTTC---------CGGCCAGTACAGCT 637
BSNT_01747___ 635 GGATTATTAACGGCATTGAGTGGGCCATTTCCAACAATATGGATGTTATC 684
||||.||||||||.|||||||||||.||..|.|||||||||||.|||||.
RBAM_010500__ 638 GGATCATTAACGGAATTGAGTGGGCGATCGCAAACAATATGGACGTTATT 687
BSNT_01747___ 685 AACATGAGCCTTGGCGGACCTACTGGTTCTACAGCGCTGAAAACAGTAGT 734
|||||||||||.|||||||||.||||||||.|||||.|.|||.|.|.|||
RBAM_010500__ 688 AACATGAGCCTCGGCGGACCTTCTGGTTCTGCAGCGTTAAAAGCGGCAGT 737
BSNT_01747___ 735 TGATAAAGCGGT---TTCCAGCGGTATCGTCGTTGCTGCCGCAGCCGGAA 781
|||.|||||.|| ||||.||| ||||.||.|..||.||||||||.|
RBAM_010500__ 738 TGACAAAGCCGTTGCTTCCGGCG---TCGTAGTCGTAGCGGCAGCCGGTA 784
BSNT_01747___ 782 ACGAAGGTTCATCCGGAAGCACAAGCACAGTCGGCTACCCTGCAAAATAT 831
|||||||..|.|||||..||.||||||||||.||||||||||..|||||.
RBAM_010500__ 785 ACGAAGGCACTTCCGGCGGCTCAAGCACAGTGGGCTACCCTGGTAAATAC 834
BSNT_01747___ 832 CCTTCTACTATTGCAGTAGGTGCGGTAAACAGCAGCAACCAAAGAGCTTC 881
||||||...|||||.|||||.||.||.||||||||||||||||||||.||
RBAM_010500__ 835 CCTTCTGTCATTGCGGTAGGCGCTGTTAACAGCAGCAACCAAAGAGCATC 884
BSNT_01747___ 882 ATTCTCCAGCGTAGGTTCTGAGCTTGATGTAATGGCTCCTGGCGTGTCCA 931
.|||||.|||||||||||||||||||||||.|||||.||.|||||.||.|
RBAM_010500__ 885 TTTCTCAAGCGTAGGTTCTGAGCTTGATGTCATGGCACCAGGCGTCTCTA 934
BSNT_01747___ 932 TCCAAAGCACACTTCCTGGAGGCACTTACGGCGCTTATAACGGAACGTCC 981
||||||||||.|||||||||..||..||||||||.||.||.||.|||||.
RBAM_010500__ 935 TCCAAAGCACGCTTCCTGGAAACAAATACGGCGCGTACAATGGTACGTCA 984
BSNT_01747___ 982 ATGGCGACTCCTCACGTTGCCGGAGCAGCAGCGCTAATTCTTTCTAAGCA 1031
|||||..||||.||||||||||||||.||.||..|.||||||||||||||
RBAM_010500__ 985 ATGGCATCTCCGCACGTTGCCGGAGCGGCTGCTTTGATTCTTTCTAAGCA 1034
BSNT_01747___ 1032 CCCGACTTGGACAAACGCGCAAGTCCGTGATC-GTTTAGAAAGCACTGCA 1080
|||||..|||||||||.|.|||||||| .|.| |||||||||.|||..|.
RBAM_010500__ 1035 CCCGAACTGGACAAACACTCAAGTCCG-CAGCAGTTTAGAAAACACCACT 1083
BSNT_01747___ 1081 ACATATCTTGGAAACTCTTTCTACTATGGAAAAGGGTTAATCAACGTACA 1130
|||.|.|||||..|..||||||||||.|||||||||.|.|||||||||||
RBAM_010500__ 1084 ACAAAACTTGGTGATGCTTTCTACTACGGAAAAGGGCTGATCAACGTACA 1133
BSNT_01747___ 1131 AGCAGCTGCACAATAA 1146
.||.||.||.||.|||
RBAM_010500__ 1134 GGCGGCAGCTCAGTAA 1149
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