Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01761 and RBAM_010560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:28
# Commandline: needle
# -asequence dna-align/BSNT_01761___hemAT.1.9828.seq
# -bsequence dna-align/RBAM_010560___hemAT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01761___hemAT-RBAM_010560___hemAT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01761___hemAT-RBAM_010560___hemAT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01761___hemAT
# 2: RBAM_010560___hemAT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1306
# Identity: 1020/1306 (78.1%)
# Similarity: 1020/1306 (78.1%)
# Gaps: 20/1306 ( 1.5%)
# Score: 3921.5
#
#
#=======================================
BSNT_01761___ 1 TTGTTATTTAAAAAAGACAGAAAACAAGAAACAGCTTACTTTTCAGATTC 50
||||||||||||||||||.|.|||.|||||||||||||.|||||.||..|
RBAM_010560__ 1 TTGTTATTTAAAAAAGACCGCAAAAAAGAAACAGCTTATTTTTCGGAAGC 50
BSNT_01761___ 51 AAACGGACAGCAAAAAAACCGCATTCAGCTCACAAACAAACATGCAGATG 100
..|.|| ||||||.|||||...|||..||||..||.|||||||||
RBAM_010560__ 51 CGATGG------AAAAAAACGCATCGCGCTTTCAAATCAATATGCAGATG 94
BSNT_01761___ 101 TCAAAAAACAGCTCAAAATGGTCAGGCTGGGAGATGCTGAGCTTTACGTG 150
||.||||||||||.||||||||||||||.|||.|.|..||.|||.|.|||
RBAM_010560__ 95 TCCAAAAACAGCTGAAAATGGTCAGGCTCGGAAACGAAGAACTTCATGTG 144
BSNT_01761___ 151 TTAGAGCAGCTTCAGCCACTGATTCAAGAAAATATCGTATAC-ATCGTCG 199
.|.||..||||.|||||..|.|||.|||||.||||| |..|| |||||||
RBAM_010560__ 145 CTTGAAGAGCTGCAGCCGTTAATTAAAGAACATATC-TCAACAATCGTCG 193
BSNT_01761___ 200 ATGCGTTTTATAAAAATCTTGACCATGAAAGCTCATTGATGGATATCATT 249
||.|.|||||...|||.||.||.||.||||..|||||.|||...||||||
RBAM_010560__ 194 ATTCCTTTTACCGAAACCTGGATCACGAAAAATCATTAATGACGATCATT 243
BSNT_01761___ 250 AATGATCACAGCTCAGTTGACCGCTTAAAACAAACGTTAAAACGGCATAT 299
||.||.||||||.|.||.||.|||.|.|||.||||.|||...||.|||||
RBAM_010560__ 244 AACGACCACAGCACGGTCGAGCGCCTGAAAAAAACATTACGGCGTCATAT 293
BSNT_01761___ 300 TCAGGAAATGTTTGCAGGTGTTATCGATGATGAATTCATTGAAAAGCGAA 349
.||.||.||||||||.||....||.||||||||||||||||||||..||.
RBAM_010560__ 294 CCATGAGATGTTTGCCGGCACGATTGATGATGAATTCATTGAAAAAAGAC 343
BSNT_01761___ 350 ACCGAATCGCCTCCATCCATTTAAGAATCGGCCTTCTGCCAAAATGGTAT 399
|.||.|||||.||||||||.||..|.|||||||||...||.|||||||||
RBAM_010560__ 344 AGCGCATCGCTTCCATCCACTTGCGGATCGGCCTTGAACCGAAATGGTAT 393
BSNT_01761___ 400 ATGGGCGCATTTCAAGAACTCATTTTGTCAATGATTGACATTTATGAAGC 449
|||||.||.||.||.||.||..||.||||.|||||..||||.||||||||
RBAM_010560__ 394 ATGGGAGCGTTCCAGGATCTGCTTCTGTCGATGATGAACATATATGAAGC 443
BSNT_01761___ 450 GTCCATTACAAATCAGCAAGAACTGCTAAAAGCCATTAAAGCAACAACAA 499
..|||||.|..||..|||.||.||..|||||||.||.|||||.||.||.|
RBAM_010560__ 444 AACCATTCCGGATTTGCATGAGCTTTTAAAAGCGATCAAAGCGACGACGA 493
BSNT_01761___ 500 AAATCTTGAA-CTTAGAACAGCAGCTTGTCCTTGAAGCGTTTCAAAGCGA 548
||||.||||| ||| |||||||||||.|||||||||||.||.||.|..||
RBAM_010560__ 494 AAATATTGAATCTT-GAACAGCAGCTCGTCCTTGAAGCATTCCAGACTGA 542
BSNT_01761___ 549 GTACAA---CCAGACCCGTGATGAACAAGAAGAAAAGAAAAACCTTCTTC 595
.||.|| |||| |||||.||||||||.|||||||||..||..||||
RBAM_010560__ 543 ATATAACTGCCAG---CGTGACGAACAAGAGGAAAAGAAAGCCCGCCTTC 589
BSNT_01761___ 596 ATCAGAAAATTCAAGAAACCTCTGGATCGATTGCCAATCTGTTTTCAGAA 645
||||.|||||.||.|||||.||.|||||..||||..||.|||||||||||
RBAM_010560__ 590 ATCAAAAAATCCAGGAAACATCCGGATCACTTGCTGATTTGTTTTCAGAA 639
BSNT_01761___ 646 ACAAGCAGATCAGTTCAAGAGCTTGTGGACAAATCTGAAGGCATTTCTCA 695
||.||||||.|.||.||.|||||.||.||.|||||.||.|||||||| ||
RBAM_010560__ 640 ACGAGCAGAGCCGTGCAGGAGCTGGTCGATAAATCCGAGGGCATTTC-CA 688
BSNT_01761___ 696 A-GCATCCAAAGCCGGCACTGTAACATCCAGCAC-TGTTGAAGAAAAGTC 743
| ||.||.||||||||||||||.||.||| |.|| |||.||||||||.||
RBAM_010560__ 689 AGGCGTCAAAAGCCGGCACTGTCACTTCC-GTACATGTCGAAGAAAAATC 737
BSNT_01761___ 744 GATCGGCGGAAAAAAAGAGCTAGAAGTCCAGCAAAAACAGATGAACAAAA 793
.||||||||.|||||||||||.|||..||||||.||.||||||||.||||
RBAM_010560__ 738 AATCGGCGGGAAAAAAGAGCTTGAAAGCCAGCAGAAGCAGATGAATAAAA 787
BSNT_01761___ 794 TTGACACAAGCCTTGTCCAAATCGAAAAAGAAATGGTCAAGCTGGATGAA 843
|.|||.|.||||||.|.||.||.|||.|||||||||.|||||||.||||.
RBAM_010560__ 788 TCGACGCCAGCCTTCTGCAGATTGAAGAAGAAATGGACAAGCTGAATGAC 837
BSNT_01761___ 844 ATCGCGCAGCAAATTGAAAAAATCTTCGGCATCGTCACAGGCATAGCTGA 893
|||||.|||||.||.||||||||||||||||||||.||.||.||.||.||
RBAM_010560__ 838 ATCGCCCAGCAGATCGAAAAAATCTTCGGCATCGTGACGGGGATCGCCGA 887
BSNT_01761___ 894 ACAAACAAACCTTCTCTCGCTCAATGCATCTATTGAATCCGCCCGCGCCG 943
.|||||.||.||.||.||.|||||.||.||.||.||||||||..|.||||
RBAM_010560__ 888 GCAAACGAATCTCCTGTCACTCAACGCTTCAATAGAATCCGCGAGAGCCG 937
BSNT_01761___ 944 GAGAACACGGCAAAGGCTTTGCTGTCGTGGCAAATGAAGTGCGGAAGCTT 993
|.||.|||||||||||.||.||.||.||.||.|..||.||..|.||||||
RBAM_010560__ 938 GGGAGCACGGCAAAGGGTTCGCCGTTGTCGCGACGGAGGTAAGAAAGCTT 987
BSNT_01761___ 994 TCTGAGGATACGAAAAAAACCGTCTCTACTGTTTCTGAGCTTGTGAACAA 1043
||.||||||||||||||||||||.||.||.||.||.|||||.||||||||
RBAM_010560__ 988 TCAGAGGATACGAAAAAAACCGTTTCCACCGTATCAGAGCTCGTGAACAA 1037
BSNT_01761___ 1044 TACGAATACACAAATCAACATTGTATCCAAGCATATCAAAGACGTGAATG 1093
|||.|||||||||||||||||.||.|||||.|||||||||||.||.||.|
RBAM_010560__ 1038 TACCAATACACAAATCAACATCGTGTCCAAACATATCAAAGATGTAAACG 1087
BSNT_01761___ 1094 AGCTAGTCAGCGAAAGTAAAGAAAAAATGACGCAAATTAACCGCTTATTC 1143
..||.||.||.||||..||||||||||||.||||.||.|||||.||.||.
RBAM_010560__ 1088 GACTTGTAAGTGAAACGAAAGAAAAAATGGCGCAGATCAACCGTTTGTTT 1137
BSNT_01761___ 1144 GATGAAATCGTCCACAGCATGAAAATCAGCAAAGAGCAATCAGGCAAAAT 1193
|||||.||||||||.||||||||||..||||||||.||..||||||||||
RBAM_010560__ 1138 GATGACATCGTCCAAAGCATGAAAACGAGCAAAGACCAGACAGGCAAAAT 1187
BSNT_01761___ 1194 CGACGTCGATCTGCAAGCCTTTCTTGGAGGGCTTCAGGAAGTCAGCCGCG 1243
||||||.|||.||||.||||||||.||.||.|||||.|||||||||||||
RBAM_010560__ 1188 CGACGTTGATTTGCAGGCCTTTCTCGGCGGTCTTCAAGAAGTCAGCCGCG 1237
BSNT_01761___ 1244 CCGTTTCCCATGTGGCCGCTTCCGTTGATTCGCTTGTCATCCTGACAGAA 1293
||||||||||.||.||..|.|||||||||||.|||||.|||||.||||||
RBAM_010560__ 1238 CCGTTTCCCACGTTGCATCATCCGTTGATTCACTTGTTATCCTTACAGAA 1287
BSNT_01761___ 1294 GAATAA 1299
||||||
RBAM_010560__ 1288 GAATAA 1293
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