Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01765 and RBAM_010580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:28
# Commandline: needle
# -asequence dna-align/BSNT_01765___yhxC.1.9828.seq
# -bsequence dna-align/RBAM_010580___yhxC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01765___yhxC-RBAM_010580___yhxC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01765___yhxC-RBAM_010580___yhxC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01765___yhxC
# 2: RBAM_010580___yhxC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 860
# Identity: 692/860 (80.5%)
# Similarity: 692/860 (80.5%)
# Gaps: 4/860 ( 0.5%)
# Score: 2764.0
#
#
#=======================================
BSNT_01765___ 1 TTGGCGAATCAAAAAAAGAAAACATTACCGCCTCAGCAACAGAACCAGCA 50
.||||.||.||.||.||||||||.||.|||||.|||||.||.||||.|||
RBAM_010580__ 1 ATGGCTAACCAGAAGAAGAAAACCTTGCCGCCGCAGCATCAAAACCGGCA 50
BSNT_01765___ 51 GCCTGGTTTTGAATATCTTATGGACCCGCGTCCGGTTTTTGATAAGCCGA 100
|||.||.|||||||||.|.||||||||||||||.||||||||.||.||||
RBAM_010580__ 51 GCCGGGCTTTGAATATGTAATGGACCCGCGTCCCGTTTTTGACAAACCGA 100
BSNT_01765___ 101 AGAAAGCGAAAAAATTAGAGGGCAAAACCGCTATTATTACTGGAGGAGAC 150
|....|||||||||.|.||.||.|||||.||.||.||.||.||.||||||
RBAM_010580__ 101 AAGCGGCGAAAAAACTTGAAGGGAAAACGGCGATCATCACGGGCGGAGAC 150
BSNT_01765___ 151 AGCGGGATTGGACGCGCTGTCTCGGTGTTATTCGCAAAAGAAGGGGCTAA 200
||||||||.||.|||||.||.||.||.||||||||.||.|||||.|||||
RBAM_010580__ 151 AGCGGGATCGGCCGCGCCGTATCCGTTTTATTCGCGAAGGAAGGCGCTAA 200
BSNT_01765___ 201 TGTGGTCATTGTTTA-TTTGAATGAACATCAGGACGCCGAGGAAACAAAG 249
|||||||||.||||| |||| ||||.||||||||.|||||.||.||.|||
RBAM_010580__ 201 TGTGGTCATCGTTTACTTTG-ATGAGCATCAGGATGCCGAAGAGACGAAG 249
BSNT_01765___ 250 CAGTATGTAGAAAAGGAAGGGGTAAAATGCCTGCTGATTGCAGGAGATGT 299
||.||.||||||||.||.||||..||.||.||||||||.|||||.|||||
RBAM_010580__ 250 CAATACGTAGAAAAAGAGGGGGCGAAGTGTCTGCTGATCGCAGGGGATGT 299
BSNT_01765___ 300 CGGGGATGAAGCGTTTTGCAATGATGTGGTCGGGCAGGCAAGCCAAGTGT 349
|||.||.|||||.||||||||.|||||..||.|.|||||..||||||..|
RBAM_010580__ 300 CGGCGACGAAGCCTTTTGCAACGATGTCATCCGCCAGGCGGGCCAAGCCT 349
BSNT_01765___ 350 TTCCATCCATTGATATATTGGTTAACAATGCAGCTGAGCAGCATGTCCAG 399
||||.||||||||.||..||||.|||||.||||.|||||||||.||.|||
RBAM_010580__ 350 TTCCTTCCATTGACATCCTGGTCAACAACGCAGGTGAGCAGCACGTGCAG 399
BSNT_01765___ 400 CCCAGCATTGAAAAAATCACCAGCCACCAGCTGATCAGAACCTTCCAAAC 449
||..|.|||||.||||||||.|||||||||||.||||||||.||.||.||
RBAM_010580__ 400 CCGGGGATTGAGAAAATCACGAGCCACCAGCTCATCAGAACGTTTCAGAC 449
BSNT_01765___ 450 AAACATTTTTTCTATGTTTTACTTAACAAAGGCAGTGCTGCCTCATTTAA 499
.||.||||||||.||||||||||||||.||.||.|.|||.||.||..|.|
RBAM_010580__ 450 GAATATTTTTTCAATGTTTTACTTAACGAAAGCCGCGCTCCCCCACCTGA 499
BSNT_01765___ 500 AAAAAGGGAGCTCTATTATTAATACCGCTTCAATTACCGCCTATAAAGGC 549
|||||||.||.||.||.||||||||.||.||.||||||||||||||||||
RBAM_010580__ 500 AAAAAGGAAGTTCAATCATTAATACGGCCTCTATTACCGCCTATAAAGGC 549
BSNT_01765___ 550 AATAAAACGCTGATCGATTATTCAGCGACAAAAGGCGCGATCGTTACGTT 599
.|.|||||..||||.||.|||||||||||||||||.||||||||.|||||
RBAM_010580__ 550 CACAAAACATTGATTGACTATTCAGCGACAAAAGGGGCGATCGTCACGTT 599
BSNT_01765___ 600 TACAAGGTCCCTTTCCCAGTCGCTTGTTCA-GCAGGGCATACGGGTCAAT 648
||||||.||.||||||||.||.|||| ||| .||||||||..||||.||.
RBAM_010580__ 600 TACAAGATCTCTTTCCCAATCTCTTG-TCACTCAGGGCATCAGGGTAAAC 648
BSNT_01765___ 649 GCAGTGGCACCGGGTCCCATTTGGACACCGCTTATCCCGGCCAGCTTTGC 698
||||||||.|||||.||.||.|||||.|||||.||||||||.|||||..|
RBAM_010580__ 649 GCAGTGGCGCCGGGGCCGATCTGGACGCCGCTGATCCCGGCGAGCTTCTC 698
BSNT_01765___ 699 CGCAAAAGACGTGGAAGTGTTTGGTTCAGACGTGCCGATGGAACGCCCGG 748
.||.||.||.||||||||.||.||.|||||||||||||||.|.|||||||
RBAM_010580__ 699 GGCGAAGGAAGTGGAAGTCTTCGGCTCAGACGTGCCGATGCAGCGCCCGG 748
BSNT_01765___ 749 GACAGCCGGTCGAAGTGGCGCCAAGCTATCTATACCTTGCCAGCGACGAT 798
||.||||.||.|||||||||||.||||||.|.|||.|.||.|||||.|||
RBAM_010580__ 749 GAGAGCCTGTTGAAGTGGCGCCGAGCTATTTGTACTTAGCAAGCGATGAT 798
BSNT_01765___ 799 TCCACATACGTCACAGGGCAGACGATTCACGTCAATGGCGGAACAATTGT 848
||..|.||.|||||.||.|||||||||||.||.||.|||||.||.||.||
RBAM_010580__ 799 TCTTCCTATGTCACGGGACAGACGATTCATGTGAACGGCGGCACCATCGT 848
BSNT_01765___ 849 GAACGGATAA 858
.|||||||||
RBAM_010580__ 849 AAACGGATAA 858
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