Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01775 and RBAM_010680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:29
# Commandline: needle
# -asequence dna-align/BSNT_01775___yhjC.1.9828.seq
# -bsequence dna-align/RBAM_010680___yhjC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01775___yhjC-RBAM_010680___yhjC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01775___yhjC-RBAM_010680___yhjC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01775___yhjC
# 2: RBAM_010680___yhjC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity: 146/207 (70.5%)
# Similarity: 146/207 (70.5%)
# Gaps: 12/207 ( 5.8%)
# Score: 490.0
#
#
#=======================================
BSNT_01775___ 1 ATGAAACTGATTCACGTTCTTGCCGCTTTGCCCTTTATCGGTA-TCTTAC 49
||||||||||||||.|||||.|||||..||||||||.||||.| |||..|
RBAM_010680__ 1 ATGAAACTGATTCATGTTCTCGCCGCCCTGCCCTTTTTCGGAATTCTCGC 50
BSNT_01775___ 50 TCGGCATCCCTTTTGCAAATAAGGTGACCCCCTACGTGTTCGGCATGCCG 99
||||||.||.|||||.||...||||||.||.||.||.|||||.|||||.
RBAM_010680__ 51 -CGGCATTCCATTTGCCAACCGGGTGACGCCTTATGTTTTCGGAATGCCT 99
BSNT_01775___ 100 TTTATTCTTGCCTATATTGTGATGTGGGCTCTTTTGACCTCTGCGCTGAT 149
||.|||||.||.|||.|.||.||.|||||..|..||||.||.|..|||||
RBAM_010680__ 100 TTCATTCTCGCGTATGTCGTCATCTGGGCGGTGCTGACTTCCGTTCTGAT 149
BSNT_01775___ 150 GGCGATTGTGTA-----TGTCCTCGACAAGGAAAATAAAAAGGAGGAAGC 194
|||....||.|| || |||||.|||||.||...||..||.||
RBAM_010680__ 150 GGCCGCCGTTTACAAATTG-----GACAAAGAAAACAAGGCGGGTGAGGC 194
BSNT_01775___ 195 AGAATGA 201
.||||||
RBAM_010680__ 195 GGAATGA 201
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