Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01819 and RBAM_010840

See Amino acid alignment / Visit BSNT_01819 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:33
# Commandline: needle
#    -asequence dna-align/BSNT_01819___gerPF.1.9828.seq
#    -bsequence dna-align/RBAM_010840___gerPF.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01819___gerPF-RBAM_010840___gerPF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01819___gerPF-RBAM_010840___gerPF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01819___gerPF
# 2: RBAM_010840___gerPF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 219
# Identity:     196/219 (89.5%)
# Similarity:   196/219 (89.5%)
# Gaps:           0/219 ( 0.0%)
# Score: 888.0
# 
#
#=======================================

BSNT_01819___      1 ATGCCAGCAATTGTCGGGCCTATAGCTATCAATTCCATATCGGGCGGAGT     50
                     ||||||||||||..|||.||||||||||||||||||||||||||||||||
RBAM_010840__      1 ATGCCAGCAATTACCGGACCTATAGCTATCAATTCCATATCGGGCGGAGT     50

BSNT_01819___     51 CGTAAACTTTGGTGATTCCTTTTACCTTTCTCCGAAAAGCTCTTCAAAAT    100
                     |||||||||||||||||||||||||||||||||.|||||||||||.||||
RBAM_010840__     51 CGTAAACTTTGGTGATTCCTTTTACCTTTCTCCAAAAAGCTCTTCTAAAT    100

BSNT_01819___    101 CTGCGCTCGGTTCGGGAGCAGGAAACACGGGAGATTTCCTTCTATTAAAT    150
                     ||||||||||||||||||||||.||.||.|||||||||||..|||||||.
RBAM_010840__    101 CTGCGCTCGGTTCGGGAGCAGGCAATACCGGAGATTTCCTGTTATTAAAC    150

BSNT_01819___    151 AATGCAGTCAACGCGACAAATTATATAGACCCCGATGTCAACGATCAGGA    200
                     ||.|..|||||.||||||||.|||||||||||||||||||.||||||..|
RBAM_010840__    151 AACGTTGTCAATGCGACAAACTATATAGACCCCGATGTCAGCGATCAAAA    200

BSNT_01819___    201 TATGGTTGGAAACGGATAA    219
                     |.||||.|||||||..|||
RBAM_010840__    201 TGTGGTAGGAAACGCCTAA    219


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