Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01823 and RBAM_010870
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:33
# Commandline: needle
# -asequence dna-align/BSNT_01823___gerPC.1.9828.seq
# -bsequence dna-align/RBAM_010870___gerPC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01823___gerPC-RBAM_010870___gerPC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01823___gerPC-RBAM_010870___gerPC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01823___gerPC
# 2: RBAM_010870___gerPC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 621
# Identity: 483/621 (77.8%)
# Similarity: 483/621 (77.8%)
# Gaps: 6/621 ( 1.0%)
# Score: 1836.5
#
#
#=======================================
BSNT_01823___ 1 ATGTATGATCAATCTGTTTCCTCTTACCTGCAAAACTTGAATTCCTTCGT 50
||||||||||||||.|||||.||.||||||||.||.||.|||||.|||||
RBAM_010870__ 1 ATGTATGATCAATCCGTTTCATCCTACCTGCAGAATTTAAATTCTTTCGT 50
BSNT_01823___ 51 TCAGCAGCAGGCGATTCACATTCAGCAGCTCGAACGTCAGCTGAAAGAGA 100
.||||||||||||...||.||||||.||||||||||.||||||||||| |
RBAM_010870__ 51 CCAGCAGCAGGCGCAGCAGATTCAGGAGCTCGAACGGCAGCTGAAAGA-A 99
BSNT_01823___ 101 TT-CAAACTGAAATGAATACGATGAAACAGCGGCCGGCCACTACCATTGA 149
|| ||||.||||||....|||.||||.||||.|||..|.||.|..||.||
RBAM_010870__ 100 TTCCAAAATGAAATTTCAACGCTGAAGCAGCAGCCTTCTACAAGAATCGA 149
BSNT_01823___ 150 GCGTGTGGAGTATAAATTTGATCAGCTGAAAATCGAAAGGCTCGACGGGA 199
.||..|.||||||||||||||||||||||||||.|||.||||.||.||.|
RBAM_010870__ 150 TCGGCTCGAGTATAAATTTGATCAGCTGAAAATTGAACGGCTGGAAGGAA 199
BSNT_01823___ 200 CTTTGAATATCGGCTTAAATCCTACTGACCCGAACAGCGTCCAAAACTTT 249
|..||||||||||.||.|||||.|||||.|||||...|||.||||||||.
RBAM_010870__ 200 CGCTGAATATCGGATTGAATCCGACTGATCCGAATGCCGTGCAAAACTTC 249
BSNT_01823___ 250 GAAGTCAGCCAGTCGACACCGCAAATCGGGATGATGCAGCAGGAAGAGAG 299
||||||.|||||.|..|.|||||..||||.|||||||||||||||.|| |
RBAM_010870__ 250 GAAGTCGGCCAGACATCTCCGCAGGTCGGAATGATGCAGCAGGAACAG-G 298
BSNT_01823___ 300 C--GCTCAGCTCATGCAGCAGATCCGCCAGAATGTCGACATGTACTTAAC 347
| || ||||..||||||||.||||||||.||.|||||.||||||.|.|.
RBAM_010870__ 299 CGGGC-CAGCAAATGCAGCAAATCCGCCAAAACGTCGATATGTACCTGAA 347
BSNT_01823___ 348 CGAGGAAATCCCAGATATTTTGGAACAGCTTGAAAACCAATATGACAGCA 397
.||.||||||||.|...||||.||.|||||.||||..||.|||||.||||
RBAM_010870__ 348 TGAAGAAATCCCCGCGCTTTTAGAGCAGCTCGAAACTCAGTATGAGAGCA 397
BSNT_01823___ 398 GACTTGACGATACAAACAGACATCATGTTATTGAAGACATCAGAAAACAA 447
|.||.|||||.||.||||.|.|||||.||||||||||.||||||||.||.
RBAM_010870__ 398 GGCTGGACGAAACGAACAAATATCATATTATTGAAGATATCAGAAAGCAG 447
BSNT_01823___ 448 ATGGACAGCCGAATCCATTATTATATGTCCCATATCAAAAAAGAAGAACA 497
|||||||||||.||.||.||||||.||||||||.||...|||||||||.|
RBAM_010870__ 448 ATGGACAGCCGGATTCAGTATTATCTGTCCCATGTCCCGAAAGAAGAAAA 497
BSNT_01823___ 498 TACACCGCCTGCACAATATGCAGAACATATCGCTGAGCATGTGAAGCGTG 547
.||..||||.||.||||||||.||.||.||.||.||.|||||||||||||
RBAM_010870__ 498 CACGGCGCCCGCGCAATATGCCGAGCAGATTGCCGAACATGTGAAGCGTG 547
BSNT_01823___ 548 ATGTCATCCGCGCTGTAGAACACTTTCTGGAGCATATTCCATCAGAAATG 597
||.|..||.|.||.||.||.||||||.|..||||.||.||....||||||
RBAM_010870__ 548 ATATTGTCAGAGCCGTCGAGCACTTTATTAAGCACATACCTGGTGAAATG 597
BSNT_01823___ 598 AAAGGAGATGAGCAAGCATGA 618
|||||.|||||.|...|||||
RBAM_010870__ 598 AAAGGTGATGATCCGTCATGA 618
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