Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02955 and RBAM_011160
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:48
# Commandline: needle
# -asequence dna-align/BSNT_02955___fosB.1.9828.seq
# -bsequence dna-align/RBAM_011160___fosB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02955___fosB-RBAM_011160___fosB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02955___fosB-RBAM_011160___fosB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02955___fosB
# 2: RBAM_011160___fosB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 460
# Identity: 314/460 (68.3%)
# Similarity: 314/460 (68.3%)
# Gaps: 56/460 (12.2%)
# Score: 1056.0
#
#
#=======================================
BSNT_02955___ 1 ------------GTGG---------AGATAAAAGGAATCAATCA-CTTGC 28
|||| |.||||||||||||||||| ||| |
RBAM_011160__ 1 ATGTTAAATGAGGTGGGGAAAATAAACATAAAAGGAATCAATCATCTT-C 49
BSNT_02955___ 29 TATTTTCAGTTTCGCATTTGGATACATCGATTGATTTTTATCAAAAAGTG 78
|.|||||.|||||..|||||||.|.|||.||.||.||||||.|||||||.
RBAM_011160__ 50 TTTTTTCTGTTTCAAATTTGGAAAAATCTATAGAATTTTATGAAAAAGTA 99
BSNT_02955___ 79 TTTGATGCAAAGCTTTTGGTAAAGGGAAGAACAACTGCATATTTTGACAT 128
|||.|||||.||||..||||.||.|||..||..||.|||||||||||..|
RBAM_011160__ 100 TTTCATGCACAGCTCCTGGTTAAAGGACAAAAGACAGCATATTTTGATCT 149
BSNT_02955___ 129 GAACGGCATCTGGCTAGCGCTTAATGAAGAACCAGACATCCCGAGAAATG 178
||||||..|.|||||.||.|||||...|||..|.||.||.||.|||||||
RBAM_011160__ 150 GAACGGGCTTTGGCTTGCACTTAACTTAGAGGCGGATATACCAAGAAATG 199
BSNT_02955___ 179 ----ACATTAAGCTTTCTTATACCCATATTGCTTTTACAATTG------A 218
||||.|| ||||||||.|||||.||.|||||||||| |
RBAM_011160__ 200 AAATACATAAA----TCTTATACGCATATGGCCTTTACAATTGACCCAAA 245
BSNT_02955___ 219 AGATCATGAATTTGAGG--AGGTATCAGCTAAATTAAAAAGACTTCATGT 266
|||| |||||.| |...|||| ||..|||||||..||..||||
RBAM_011160__ 246 AGAT------TTTGATGCAATACATCA--TAGGTTAAAAAATCTAAATGT 287
BSNT_02955___ 267 CAATATTCTGCCTGGCAGAGAAC--GAGATGAACGCGATCGAAAATCAAT 314
.|||||..|...||| |.|..| |.|||.|.|..||||.|||||||||
RBAM_011160__ 288 AAATATATTAAATGG--GCGTCCTAGGGATAAGCAAGATCAAAAATCAAT 335
BSNT_02955___ 315 TTATTTTACCGACCCTGACGGCCACAAATTTGAATTTCATACCGGAACCC 364
|||||||||.||.||.||.||.||.|||||||||||.||.||.||.||.|
RBAM_011160__ 336 TTATTTTACTGATCCCGATGGGCATAAATTTGAATTCCACACAGGTACAC 385
BSNT_02955___ 365 TTCAAGACAGGCT-TCGATATTACAAACAAGAAAAAACGCATATGCACTT 413
|.||||||||.|| || .|||||||||.||||.|||.|.||||||.|.||
RBAM_011160__ 386 TCCAAGACAGACTGTC-CTATTACAAAAAAGATAAACCTCATATGAAATT 434
BSNT_02955___ 414 TT-TATGA-- 420
|| |||..
RBAM_011160__ 435 TTATATTTAA 444
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