Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01897 and RBAM_011320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:38
# Commandline: needle
# -asequence dna-align/BSNT_01897___yjzB.1.9828.seq
# -bsequence dna-align/RBAM_011320___yjzB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01897___yjzB-RBAM_011320___yjzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01897___yjzB-RBAM_011320___yjzB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01897___yjzB
# 2: RBAM_011320___yjzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 231
# Identity: 163/231 (70.6%)
# Similarity: 163/231 (70.6%)
# Gaps: 21/231 ( 9.1%)
# Score: 512.0
#
#
#=======================================
BSNT_01897___ 1 TTGGATGTGTTTTCAAGAATGATGTTCGGCGATGCAGCA-AAACCAACAG 49
.|||||.|.||.||.|.||||||||||||||||.| || |.|||...|.
RBAM_011320__ 1 ATGGATATTTTCTCCAAAATGATGTTCGGCGATTC--CAGAGACCGGGAT 48
BSNT_01897___ 50 AAGAGAA--GGAGGAACAGCAAGAGGAGGTTTCTCAGAC---AAACGACG 94
|| |||| |||.|||.|.|..|||.|| .|||||.| ||||||.|
RBAM_011320__ 49 AA-AGAACCGGAAGAAAACCCGGAGCAG---CCTCAGGCTGAAAACGAAG 94
BSNT_01897___ 95 AAAAGA-CGATTAATTACATGCATATTATGGACCAAATCGGTTCAATTAT 143
||.||| || ||||||..||..|.|||.|.||..|.||.||.||.||
RBAM_011320__ 95 AAGAGATCG----ATTACAACCACGTGATGAATCAGCTGGGGTCCATCAT 140
BSNT_01897___ 144 GAACTCTCTTGATCAAATCAAGCCCG-CTTTAAAGGAGCTT-GCACCCAT 191
|||||||||.||||||.|.||||||| .||||||| .||| ||.||.||
RBAM_011320__ 141 GAACTCTCTGGATCAATTAAAGCCCGTATTTAAAG--ACTTCGCGCCGAT 188
BSNT_01897___ 192 GCTCTCCGCTATTAAAAAGAAAATCATGTGA 222
|.|.||||||||.||.||.||||||||||||
RBAM_011320__ 189 GGTGTCCGCTATAAAGAAAAAAATCATGTGA 219
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