Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01898 and RBAM_011330
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:38
# Commandline: needle
# -asequence dna-align/BSNT_01898___fabHA.1.9828.seq
# -bsequence dna-align/RBAM_011330___fabHA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01898___fabHA-RBAM_011330___fabHA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01898___fabHA-RBAM_011330___fabHA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01898___fabHA
# 2: RBAM_011330___fabHA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 940
# Identity: 776/940 (82.6%)
# Similarity: 776/940 (82.6%)
# Gaps: 2/940 ( 0.2%)
# Score: 3212.0
#
#
#=======================================
BSNT_01898___ 1 ATGAAAGCTGGAATACTTGGTGTTGGACGTTACATTCCTGAGAAGGTTTT 50
||||||||||||||.|||||.||.||.|||||.||.||.||.||.||..|
RBAM_011330__ 1 ATGAAAGCTGGAATTCTTGGCGTCGGCCGTTATATCCCGGAAAAAGTGCT 50
BSNT_01898___ 51 AACAAATCATGATCTTGAAAAAATGGTTGAAACTTCTGACGAGTGGATTC 100
.||||||||||||||||||.|||||||.||.||.||.|||||||||||||
RBAM_011330__ 51 GACAAATCATGATCTTGAACAAATGGTAGATACATCGGACGAGTGGATTC 100
BSNT_01898___ 101 GTACAAGAACAGGAATAGAAGAAAGAAGAATCGCAGCAGATGATGTGTTT 150
||||.||||||||.||||||||||||||||||||.||.||.|||.|||.|
RBAM_011330__ 101 GTACGAGAACAGGTATAGAAGAAAGAAGAATCGCCGCGGAAGATATGTAT 150
BSNT_01898___ 151 TCATCACATATGGCTGTTGCAGCAGCGAAAAATGCGCTGGAACAAGCTGA 200
|||||....|||||.|.||..||.|||.||||.|||||.||.||.||.|.
RBAM_011330__ 151 TCATCCGGCATGGCCGCTGAGGCTGCGCAAAAAGCGCTTGATCAGGCCGG 200
BSNT_01898___ 201 AGTGGCTGCTGAGGATCTGGATATGATCTTGGTTGCAACTGTTACACCTG 250
..|..|.||||||||.||.|||||||||.|.||.||.||.|||||.||||
RBAM_011330__ 201 CATTTCCGCTGAGGAGCTTGATATGATCCTCGTGGCGACGGTTACTCCTG 250
BSNT_01898___ 251 ATCAGTCATTTCCTACGGTCTCTTGTATGATTCAAGAACAGCTCGGCGCG 300
|.|||||.||.|||||.||.||.||||||||.|||||..|||||||.||.
RBAM_011330__ 251 ACCAGTCTTTCCCTACCGTTTCCTGTATGATACAAGAGAAGCTCGGGGCC 300
BSNT_01898___ 301 AAGAAAGCGTGTGCTATGGATATCAGCGCGGCTTGTGCGGGCTTCATGTA 350
||.||||||||.||.||||||||||||||.||.||||||||.||.|||||
RBAM_011330__ 301 AAAAAAGCGTGCGCGATGGATATCAGCGCCGCATGTGCGGGTTTTATGTA 350
BSNT_01898___ 351 CGGGGTTGTAACCGGTAAACAATTTATTGAATCCGGAACCTACAAGCATG 400
|||..|.|||||||..||||||||.||||||||...|||.|||||.||||
RBAM_011330__ 351 CGGTATCGTAACCGCCAAACAATTCATTGAATCGCAAACATACAAACATG 400
BSNT_01898___ 401 TTCTAGTTGTCGGTGTAGAGAAGCTCTCAAGCATTACCGACTGGGAAGAC 450
|.||.||.|||||.||.||.||||||||||||||||||||||||||.|||
RBAM_011330__ 401 TCCTCGTGGTCGGCGTGGAAAAGCTCTCAAGCATTACCGACTGGGACGAC 450
BSNT_01898___ 451 CGCAATACAGCCGTTCTGTTTGGAGACGGAGCAGGCGCTGCGGTAGTCGG 500
||||||||.||.||.|||||.|||||||||||.||.||.|||||..||||
RBAM_011330__ 451 CGCAATACGGCTGTGCTGTTCGGAGACGGAGCCGGAGCGGCGGTCATCGG 500
BSNT_01898___ 501 GCCAGTCAGTGATGACAGAGGAATCCTTTCATTTGAACTAGGAGCCGACG 550
.||.|||||.||.||||||||.||.||.||||||||.||.|||||.||||
RBAM_011330__ 501 ACCGGTCAGCGACGACAGAGGCATACTGTCATTTGAGCTCGGAGCAGACG 550
BSNT_01898___ 551 GCACAGGCGGTCAGCACTTGTATCTGA-ATGAAAAACGACATACAATCAT 599
|.|||||||||||||||||||| ||.| ||||||||.|.|||||||||||
RBAM_011330__ 551 GTACAGGCGGTCAGCACTTGTA-CTTAGATGAAAAAGGGCATACAATCAT 599
BSNT_01898___ 600 GAATGGACGAGAAGTTTTCAAATTTGCAGTCCGCCAAATGGGAGAATCAT 649
|.|||||.|||||||.||||||||.||.|||||.||||||||.|||||..
RBAM_011330__ 600 GCATGGAAGAGAAGTATTCAAATTCGCCGTCCGGCAAATGGGTGAATCGA 649
BSNT_01898___ 650 GCGTAAATGTCATTGAAAAAGCCGGACTTTCAAAAGAGGATGTCGACTTT 699
|.|||||||||||||||||||||||.||.||.||||||||.||.||||||
RBAM_011330__ 650 GTGTAAATGTCATTGAAAAAGCCGGCCTCTCCAAAGAGGACGTAGACTTT 699
BSNT_01898___ 700 TTGATTCCGCATCAGGCGAACATCCGTATCATGGAAGCTGCTCGCGAGCG 749
|||||||||||||||||.||||||||.|||||||||||.||.||.||.||
RBAM_011330__ 700 TTGATTCCGCATCAGGCAAACATCCGCATCATGGAAGCGGCACGGGAACG 749
BSNT_01898___ 750 TTTAGAGCTTCCTGTCGAAAAGATGTCTAAAACTGTTCATAAATATGGAA 799
|||.||||||||.||.|||||||||||||||||.||.|||||||||||||
RBAM_011330__ 750 TTTGGAGCTTCCGGTTGAAAAGATGTCTAAAACAGTCCATAAATATGGAA 799
BSNT_01898___ 800 ATACTTCTGCCGCATCCATTCCGATCTCTCTTGTAGAAGAATTGGAAGCC 849
|.||.||.||.||||||||||||||.||..|.|||||.|||.|||||||.
RBAM_011330__ 800 ACACATCCGCAGCATCCATTCCGATTTCATTAGTAGAGGAACTGGAAGCA 849
BSNT_01898___ 850 GGTAAAATCAAAGACGGCGATGTGGTCGTTATGGTAGGGTTCGGCGGAGG 899
||.|||||.|||||||||||.||..||||.|||||.||.|||||||||||
RBAM_011330__ 850 GGCAAAATTAAAGACGGCGACGTCATCGTCATGGTCGGTTTCGGCGGAGG 899
BSNT_01898___ 900 ACTAACATGGGGCGCCATTGCAATCCGCTGGGGCCGATAA 939
|.|.||||||||||||||.|||||.||||||||.||||||
RBAM_011330__ 900 ATTGACATGGGGCGCCATAGCAATACGCTGGGGACGATAA 939
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