Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01899 and RBAM_011340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:38
# Commandline: needle
# -asequence dna-align/BSNT_01899___fabF.1.9828.seq
# -bsequence dna-align/RBAM_011340___fabF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01899___fabF-RBAM_011340___fabF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01899___fabF-RBAM_011340___fabF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01899___fabF
# 2: RBAM_011340___fabF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1245
# Identity: 1030/1245 (82.7%)
# Similarity: 1030/1245 (82.7%)
# Gaps: 9/1245 ( 0.7%)
# Score: 4285.0
#
#
#=======================================
BSNT_01899___ 1 ATGACTAAAAAAAGAGTAGTTGTTACAGGACTTGGAGCATTATCTCCACT 50
||||.|||||||||||||||.||||||||.||||||||..|.|||||.||
RBAM_011340__ 1 ATGAGTAAAAAAAGAGTAGTCGTTACAGGGCTTGGAGCCCTGTCTCCGCT 50
BSNT_01899___ 51 TGGCAACGACGTCGATACAAGTTGGAATAACGCAATCAACGGTGTGTCCG 100
|||.|||||||.|||.|||||.|||||.||.||||||..|||.||.||||
RBAM_011340__ 51 TGGAAACGACGCCGAAACAAGCTGGAAAAATGCAATCGGCGGCGTATCCG 100
BSNT_01899___ 101 GAATCGGTCCGATCACTCGTGTTGACGCTGAAGAATATCCGGCAAAAGTT 150
|||||||.||||||||.|||||.||..|.||.||.||||||||.|||||.
RBAM_011340__ 101 GAATCGGACCGATCACACGTGTGGAATCGGACGAGTATCCGGCGAAAGTA 150
BSNT_01899___ 151 GCCGCTGAATTAAAAGATTTTAATGTTGAAGATTATATGGATAAAAAAGA 200
||.||||||.|.||||||||.|||.|||||.||.|.||||||||||||||
RBAM_011340__ 151 GCTGCTGAACTGAAAGATTTCAATATTGAAAATCACATGGATAAAAAAGA 200
BSNT_01899___ 201 AGCCAGAAAAATGGACCGCTTTACACAATATGCGGTTGTGGCTGCGAAAA 250
|||..||||||||||||||||.||.||||||||.||.||.||.|||||||
RBAM_011340__ 201 AGCGCGAAAAATGGACCGCTTCACCCAATATGCTGTCGTAGCCGCGAAAA 250
BSNT_01899___ 251 TGGCGGTTGAAGATGCAGATCTTAACATTACCGATGAGATCGCGCCGAGA 300
||||.|||.|||||||.|.|||.|||||.||.||.|||||||||||||||
RBAM_011340__ 251 TGGCTGTTCAAGATGCCGGTCTGAACATCACAGACGAGATCGCGCCGAGA 300
BSNT_01899___ 301 GTCGGTGTTTGGGTAGGCTCCGGTATCGGAGGACTTGAAACACTAGAGTC 350
|||||.|||||||||||.|||||.|||||.||.||||||||.||.||.||
RBAM_011340__ 301 GTCGGCGTTTGGGTAGGGTCCGGAATCGGCGGTCTTGAAACGCTTGAATC 350
BSNT_01899___ 351 TCAATTTGAAATCTTCTTAACAAAAGGCTCAAGACGGGTAAGCCCGTTTT 400
.|||||.|||||||||.|.||||||||..|.||||||||.||||||||.|
RBAM_011340__ 351 CCAATTCGAAATCTTCCTGACAAAAGGGCCGAGACGGGTCAGCCCGTTCT 400
BSNT_01899___ 401 TCGTGCCAATGATGATTCCTGACATGGCGACAGGCCAGATTTCTATTGCA 450
|.||.||.|||||||||||.||.||||||||||||||.||.||.||.||.
RBAM_011340__ 401 TTGTTCCGATGATGATTCCGGATATGGCGACAGGCCAAATCTCAATCGCT 450
BSNT_01899___ 451 TTAGGAGCAAAAGGGGTGAACTCTTGTACGGTTACAGCATGTGCTACAGG 500
.|.|||||||||||.||.||||||||||||||.||.||||||||.||.||
RBAM_011340__ 451 CTCGGAGCAAAAGGAGTCAACTCTTGTACGGTGACGGCATGTGCGACGGG 500
BSNT_01899___ 501 AACGAACTCCATCGGTGACGCGTTTAAGGTTATTCAGCGCGGTGATGCAG 550
|||||||||.|||||||||||||||||.||.|||||||||||.|||||.|
RBAM_011340__ 501 AACGAACTCTATCGGTGACGCGTTTAAAGTCATTCAGCGCGGCGATGCCG 550
BSNT_01899___ 551 ACGTGATGGTCACAGGCGGAACAGAAGCGCCGCTGACAAGAATGTCATTC 600
|.|.||||.|.||.||||||||.||||||||||||||||||||||||||.
RBAM_011340__ 551 ATGCGATGATTACGGGCGGAACGGAAGCGCCGCTGACAAGAATGTCATTT 600
BSNT_01899___ 601 GCCGGCTTTAGTGCCAACAAAGCGCTGTCTACTAATCCAGATCCGAAAAC 650
||.|||||.||.||.||||||||.||.|||||.|||||.|||||||||||
RBAM_011340__ 601 GCGGGCTTCAGCGCAAACAAAGCCCTTTCTACAAATCCTGATCCGAAAAC 650
BSNT_01899___ 651 AGCGAGCCGCCCGTTCGATAAAAACCGTGATGGCTTTGTCATGGGGGAAG 700
.||.|||||||||||.||||||||||||||.||||||||||||||.||||
RBAM_011340__ 651 GGCAAGCCGCCCGTTTGATAAAAACCGTGACGGCTTTGTCATGGGAGAAG 700
BSNT_01899___ 701 GTGCAGGGATTATCGTTCTTGAAGAACTTGAGCATGCCCTGGCCCGCGGC 750
|.||.|||||..||||.||||||||.|||||||||||.||.||||||||.
RBAM_011340__ 701 GCGCGGGGATCGTCGTGCTTGAAGAGCTTGAGCATGCGCTTGCCCGCGGT 750
BSNT_01899___ 751 GCTAAAATTTACGGAGAAATTGTCGGCTACGGCTCAACCGGAGACGCTTA 800
||.|||||.|||||.|||||||||||||||||||||||.||.|||||.||
RBAM_011340__ 751 GCGAAAATCTACGGGGAAATTGTCGGCTACGGCTCAACTGGTGACGCCTA 800
BSNT_01899___ 801 TCATATCACAGCGCCGGCCCAAGACGGTGAAGGCGGAGCGAGAGCGATGC 850
.||.||.||.|||||.|||||||||||.||||||||.|||||||||||||
RBAM_011340__ 801 CCACATTACCGCGCCTGCCCAAGACGGGGAAGGCGGTGCGAGAGCGATGC 850
BSNT_01899___ 851 AAGAAGCCATTAAAGATGCAGGCATTGCA--CCTGAGGAAATTGATTACA 898
|.|||||.|||||||||||.||||| || |||||.|||||||||||||
RBAM_011340__ 851 AGGAAGCAATTAAAGATGCGGGCAT--CAAGCCTGAAGAAATTGATTACA 898
BSNT_01899___ 899 TCAATGCTCACGGGACAAGCACGTATTACAACGACAAATACGAAACAATG 948
||||.||||||||.|||||||||||.|||||.||.|||||.||.||||..
RBAM_011340__ 899 TCAACGCTCACGGCACAAGCACGTACTACAATGATAAATATGAGACAAAA 948
BSNT_01899___ 949 GCGATTAAGACCGTTTTTGGCGAGCATGCGCATAAACTTGCGGTAAGCTC 998
||.||||||||||||||.||.||.||||||.|.||.|||||.||.||.||
RBAM_011340__ 949 GCCATTAAGACCGTTTTCGGTGATCATGCGTACAAGCTTGCCGTCAGTTC 998
BSNT_01899___ 999 TACAAAATCGATGACAGGCCACCTCTTAGGAGCAGCCGGCGGTATTGAAG 1048
.||||||||.|||||.||.||..|.|||||.||.|||||.||.|||||||
RBAM_011340__ 999 GACAAAATCAATGACGGGTCATTTGTTAGGCGCTGCCGGAGGAATTGAAG 1048
BSNT_01899___ 1049 CCATTTTCTCTATCCTGGCCATTAAAGAAGGTGTGATTCCGCCGACAATC 1098
|.||.||||||.||.|||||||||||||.||..|.||.||||||||.||.
RBAM_011340__ 1049 CAATCTTCTCTGTCATGGCCATTAAAGACGGCATTATCCCGCCGACGATT 1098
BSNT_01899___ 1099 AATATTCAAACACCTGACGAAGAATGTGATTTGGATTATGTGCCTGATGA 1148
||.||..||||||||||||||||.||||||||.||||||||.||.||..|
RBAM_011340__ 1099 AACATCGAAACACCTGACGAAGAGTGTGATTTAGATTATGTACCGGACAA 1148
BSNT_01899___ 1149 AGCCCGCAGA-CAGGAACTTAATTATGTTCTCAGCAACTCATTAGGATTC 1197
|||.||| || |||||..|.||....||||||||||||||..|.||.|||
RBAM_011340__ 1149 AGCGCGC-GAGCAGGATGTCAACGTCGTTCTCAGCAACTCGCTCGGCTTC 1197
BSNT_01899___ 1198 GGCGGACACAACGCAACATTAATCTTTAAGAAATATCAATCATAA 1242
||||||||.||.||.||.||.||||||||.||||||||||.|
RBAM_011340__ 1198 GGCGGACATAATGCCACTTTGATCTTTAAAAAATATCAATAA--- 1239
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