Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01906 and RBAM_011390
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:39
# Commandline: needle
# -asequence dna-align/BSNT_01906___appB.1.9828.seq
# -bsequence dna-align/RBAM_011390___appB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01906___appB-RBAM_011390___appB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01906___appB-RBAM_011390___appB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01906___appB
# 2: RBAM_011390___appB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 958
# Identity: 730/958 (76.2%)
# Similarity: 730/958 (76.2%)
# Gaps: 14/958 ( 1.5%)
# Score: 2692.0
#
#
#=======================================
BSNT_01906___ 1 ATGGCTGCATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATT 50
||||.|.||||||||.|..|..||||.||||||||..|.||||||.|.||
RBAM_011390__ 1 ATGGTTACATATATTTTACGGCGAACATTAATGTCCTTGCCGATTCTCTT 50
BSNT_01906___ 51 GGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATC 100
.||.|||||.|||||.||.||||..|||||||||||.|||||.|||||.|
RBAM_011390__ 51 AGGCATTACAATTTTGTCGTTTGCCATCATGAAAGCAGCGCCGGGAGACC 100
BSNT_01906___ 101 CGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAG 150
|||||.||.|.|||||||||||.|.||||||.||.||.|||||.|...|.
RBAM_011390__ 101 CGATGTCACTTATGATGGACCCTACAATCAGTCAAGCGGACAGGGCAAAA 150
BSNT_01906___ 151 TTTATTGAAAAATACGGTCTGAATGATCCTCAGTAC--GTTCAATATTTA 198
||.||||||||||||||..||||||||| |.|.|| |||||||||.|.
RBAM_011390__ 151 TTCATTGAAAAATACGGGTTGAATGATC--CGGAACCTGTTCAATATGTG 198
BSNT_01906___ 199 AAGTGGCTAGGCAACATGGTGCAGGGTGATTTCGGAACGTCTATTGTCAG 248
||.|||||.||.||.|||.||||.||.||||||||.||.|||||.||||.
RBAM_011390__ 199 AAATGGCTGGGGAATATGCTGCAAGGGGATTTCGGGACTTCTATCGTCAA 248
BSNT_01906___ 249 AAAAGGAACGCCTGTTTCAGAATTGA--TTATGGCAAGACTACCCAATAC 296
.|||||.||.||.|||||.|||.|.| |||| |..|..||||.|||||
RBAM_011390__ 249 GAAAGGCACTCCAGTTTCTGAACTTATCTTAT--CCCGCTTACCGAATAC 296
BSNT_01906___ 297 GCTCCTGCTGATGCTGGTTTCAACGATTTTGGCTCTTATGATTTCTATTC 346
|.|..||||.|||||..|.|||||..||.|.||||||.|.||||||||||
RBAM_011390__ 297 GATTGTGCTTATGCTTTTCTCAACCCTTGTCGCTCTTCTTATTTCTATTC 346
BSNT_01906___ 347 CGTTCGGTGTCCTGTCGGCAAAGCGGCCGTATTCAAAAATCGACTATGGC 396
|.||.|||||.|||||.||.||.||.||.|||||||||.|.||.||.||.
RBAM_011390__ 347 CATTTGGTGTTCTGTCAGCGAAACGTCCTTATTCAAAATTGGATTACGGG 396
BSNT_01906___ 397 ATTACATTTACCTCGTTTATAGGTCTGGCTATTCCAAACTTTTGGTTTGG 446
||.||..||||.||.|||.||||.||.||.|||||.||.||||||||.||
RBAM_011390__ 397 ATAACTGTTACTTCATTTTTAGGGCTTGCCATTCCGAATTTTTGGTTCGG 446
BSNT_01906___ 447 ATTAATTTTGATTATGGTGTTATCGGTAAATCTCGGCTGGTTTCCAACCG 496
.||.|||||.||.|||||.|||||.||||||||.||.||||||||.||.|
RBAM_011390__ 447 TTTGATTTTAATCATGGTTTTATCTGTAAATCTGGGGTGGTTTCCCACTG 496
BSNT_01906___ 497 GGGGTGTCGAG-ACGCTGAATACCGAATTCAATATATTTGACCGGATT-C 544
|.||.|| .|| ||..|||||.|.||.||.||.|||||||||| |||| |
RBAM_011390__ 497 GCGGAGT-AAGCACTTTGAATGCTGACTTTAACATATTTGACC-GATTGC 544
BSNT_01906___ 545 ATCATTTAATTCTGCCTGCATTCGTTCTAGCTACAGCTGACATGGCCGGA 594
||||.||.|||||||||||.||.||.||.||.||.||.||||||||.||.
RBAM_011390__ 545 ATCACTTGATTCTGCCTGCTTTTGTGCTCGCCACGGCAGACATGGCAGGG 594
BSNT_01906___ 595 CTGACGAGATACACGAGATCCAATATGCTTGATGTATTAAATCAAGATTA 644
.|.|||||||||||.|||||||.||||||||||||.|||||.||.|||||
RBAM_011390__ 595 ATAACGAGATACACAAGATCCAGTATGCTTGATGTGTTAAAACAGGATTA 644
BSNT_01906___ 645 TATTCGCACAGCGAGAGCAAAAGGATTTAAAGAGAACAGAGTGCTATTTA 694
|||.||.||.|||.|.||.||||||||...|||.||.|.||||.|.||||
RBAM_011390__ 645 TATACGAACGGCGCGTGCGAAAGGATTCCGAGATAATAAAGTGATCTTTA 694
BSNT_01906___ 695 AACATGGATTGAGGAATGCA-TTATTACCCGTCATTACAATTTTCGGTTT 743
||||.||.|||||.||.|.| ||.|| ||.|||||.||.|||||.|||.|
RBAM_011390__ 695 AACACGGTTTGAGAAACGGACTTCTT-CCTGTCATCACTATTTTTGGTCT 743
BSNT_01906___ 744 GATGATTCCTTCATTTATCGGCGGATCTGTCGTTGTCGAACAAATTTTCA 793
||||||.||.|||||||||||.|||.|.||.||.||.|||||.|||||.|
RBAM_011390__ 744 GATGATACCGTCATTTATCGGGGGAGCGGTAGTGGTAGAACAGATTTTTA 793
BSNT_01906___ 794 CTTGGCCGGGATTAGGAAAGCTGTTTGTCGATTCAGCATTCCAGCGCGAT 843
||||||||||..|.||.||..|||||.|.||||||||.||...|||.|||
RBAM_011390__ 794 CTTGGCCGGGTCTCGGCAAATTGTTTATTGATTCAGCCTTTTCGCGGGAT 843
BSNT_01906___ 844 TATCCGGTTATCATGGCAATGACTGTGATCTCGGCGGTTCTTGTCGTTGT 893
|||||||||||||||||.|||||.||.||.||.||.|||.|.||.||.||
RBAM_011390__ 844 TATCCGGTTATCATGGCCATGACGGTCATTTCAGCTGTTTTGGTTGTGGT 893
BSNT_01906___ 894 CGGAAACCTCATTGCAGACATCCTTTACGCGATTGTTGATCCGCGGATCG 943
.||.||..|.|||||.||||||.|.||.|||.|.||||||||.||.||.|
RBAM_011390__ 894 GGGGAATTTAATTGCGGACATCTTATATGCGCTGGTTGATCCCCGCATTG 943
BSNT_01906___ 944 AATATTAA 951
||||||||
RBAM_011390__ 944 AATATTAA 951
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