Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01924 and RBAM_011510
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:40
# Commandline: needle
# -asequence dna-align/BSNT_01924___yjbE.1.9828.seq
# -bsequence dna-align/RBAM_011510___yjbE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01924___yjbE-RBAM_011510___yjbE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01924___yjbE-RBAM_011510___yjbE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01924___yjbE
# 2: RBAM_011510___yjbE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 659
# Identity: 483/659 (73.3%)
# Similarity: 483/659 (73.3%)
# Gaps: 4/659 ( 0.6%)
# Score: 1706.0
#
#
#=======================================
BSNT_01924___ 1 ATGGAGCATGACTATCTGATTTCTCTGCTTGTCATTGTTGGGATTGACCT 50
|||..|||.||.||.|||.|.||.||.||..|||||.|.||.||||||||
RBAM_011510__ 1 ATGCCGCACGATTACCTGCTGTCCCTTCTGCTCATTATCGGAATTGACCT 50
BSNT_01924___ 51 GATCCTCGGCGGAGATAATGCGGTTGTCATTGCCATGGCCAGCAGACATT 100
.||.||||||||.||.|||||.||.|||||.||.|||||||||.|..||.
RBAM_011510__ 51 TATTCTCGGCGGTGACAATGCCGTCGTCATCGCGATGGCCAGCCGGAATC 100
BSNT_01924___ 101 TGCCGGACAAGCAAAGAAAGCAAGCCATTATTCTCGGAACATTTATTGCC 150
||.|..|.||.||||||.|||||||.||.||..|||||||.|||||.||.
RBAM_011510__ 101 TGGCCCATAAACAAAGACAGCAAGCGATCATCTTCGGAACGTTTATCGCA 150
BSNT_01924___ 151 GTTGCCATGAGAATCGGATTAACAAGTGCAGCTGTATATCTTTTGAACAT 200
||.|.|.|||||||||...|.||.||.||.||.||.|||.|.|||||..|
RBAM_011510__ 151 GTCGTCTTGAGAATCGTTCTGACGAGCGCTGCGGTCTATTTATTGAATGT 200
BSNT_01924___ 201 TCCGTTCTTGCAGTGCGCCGGC--GGAATTTTCCTGCTGTATTTAGGATA 248
|||.||.|||||.|||||.||| ||.||||| |..|||||.|.||.||
RBAM_011510__ 201 TCCTTTTTTGCAATGCGCAGGCGGGGTATTTT--TATTGTATCTCGGCTA 248
BSNT_01924___ 249 TCAGCTGCTGATTGAAAAAAAAGACACGAAACACATTAAAAGCAGCACCT 298
||||||.||||||||.||.|||||..||.|.||..|.||||||||..|.|
RBAM_011510__ 249 TCAGCTTCTGATTGAGAAGAAAGATGCGCAGCATGTGAAAAGCAGTTCTT 298
BSNT_01924___ 299 CCCTGTGGAGAGCGATACGAACGATTGTGCTTGCAGATCTCTTTATGTCG 348
|.||.||||.|||.||.||.||.||.||.||.||.|||.|||||||||||
RBAM_011510__ 299 CTCTTTGGAAAGCCATCCGCACAATCGTTCTGGCTGATATCTTTATGTCG 348
BSNT_01924___ 349 CTGGACAACGTCATCGCAGTTGCGGGAGCTTCACACGGTGAGTTTTCTCT 398
||.|||||.|||||||||||.||.||.|||||.||||||||..|..|.||
RBAM_011510__ 349 CTTGACAATGTCATCGCAGTAGCCGGCGCTTCTCACGGTGACCTGACACT 398
BSNT_01924___ 399 CGTTGTTATAGGTTTGTGTGTATCGGTTCCGGTTATTATTTGGGGCAGCA 448
.||.||.||.|||.|.|...|.|||||.|||.||||.|||||||||||||
RBAM_011510__ 399 TGTAGTGATCGGTCTCTTCATCTCGGTGCCGATTATCATTTGGGGCAGCA 448
BSNT_01924___ 449 AACTCATCCATATTGCACTAGAGAAAATACCGCTTCTGATTTACGCGGGA 498
|.|||.|.|||...||..|.||.|||||.||..|..||||.|||||.|||
RBAM_011510__ 449 AGCTCGTTCATGCCGCCATGGACAAAATGCCTTTATTGATGTACGCCGGA 498
BSNT_01924___ 499 AGCGGGCTGCTTGCTTATACTGGTGGAGAAATGATTGTCAGAGACAAAAA 548
|||||.||.||.||.|.|||.||.||.||||||||||.|.||||||..||
RBAM_011510__ 499 AGCGGTCTTCTCGCATTTACCGGCGGTGAAATGATTGCCGGAGACAGCAA 548
BSNT_01924___ 549 GCTGTCTCTTTTTATGGCGCAGCACGGCACAGTTGAAACGCTCCTCCCCA 598
||||||..||||.|||||..|.|||||||...|..|||.|.|.||.||.|
RBAM_011510__ 549 GCTGTCATTTTTCATGGCAGAACACGGCATTATACAAATGATGCTGCCGA 598
BSNT_01924___ 599 TTTTGACTGTTGCGTTTGTTATCCTTGCGAGCATTTATTACCAGCAGGTT 648
|||||||.||.|..|||||||||||.||.||.||...||||||||||...
RBAM_011510__ 599 TTTTGACCGTCGTATTTGTTATCCTCGCCAGTATGATTTACCAGCAGACC 648
BSNT_01924___ 649 GAAAAATAA 657
|||||||||
RBAM_011510__ 649 GAAAAATAA 657
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