Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01926 and RBAM_011520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:40
# Commandline: needle
# -asequence dna-align/BSNT_01926___mecA.1.9828.seq
# -bsequence dna-align/RBAM_011520___mecA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01926___mecA-RBAM_011520___mecA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01926___mecA-RBAM_011520___mecA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01926___mecA
# 2: RBAM_011520___mecA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 662
# Identity: 561/662 (84.7%)
# Similarity: 561/662 (84.7%)
# Gaps: 10/662 ( 1.5%)
# Score: 2398.0
#
#
#=======================================
BSNT_01926___ 1 ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTA 50
||||||||.|||||||||||.||||||||.||||||||||||||||||||
RBAM_011520__ 1 ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTA 50
BSNT_01926___ 51 CGGAGATATTGAAGATCGCGGTTTTGACAGAGAAGAAATTTGGTATAACC 100
.||.||||||||||||||||||||||||||.||||||||.|||||.||.|
RBAM_011520__ 51 TGGTGATATTGAAGATCGCGGTTTTGACAGGGAAGAAATCTGGTACAATC 100
BSNT_01926___ 101 GTGAGCGCAGTGAAGAACTATTCTGGGAAGTCATGGATGAAGTTCATGAA 150
|.|||||||||||||||||.|||||||||||||||||||||||.|||||.
RBAM_011520__ 101 GCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGAT 150
BSNT_01926___ 151 GAAGAGGAATTCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACT 200
|||||||||||||||||.||.||.||.|||||||||||.|||||||||.|
RBAM_011520__ 151 GAAGAGGAATTCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATT 200
BSNT_01926___ 201 GGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTTTCCAAAGACG 250
||||||||||.|.|||||.|||||.||||||||||||||||||||.||||
RBAM_011520__ 201 GGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTTTCCAAGGACG 250
BSNT_01926___ 251 GACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCA 300
|||||||.||||||||||||||.||.||.||||||||.|||||.||.|||
RBAM_011520__ 251 GACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCA 300
BSNT_01926___ 301 TCTGAGGATCTTGACGCCTTGCTGGATGATTTCCAGAAAGAAGAGCAAGC 350
..|||..||||.||.||.||.||.|||||||||||||||||||||||.||
RBAM_011520__ 301 GATGAAAATCTCGATGCTTTACTTGATGATTTCCAGAAAGAAGAGCAGGC 350
BSNT_01926___ 351 CGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG 400
||..|..|.||||||.|||||||||||||||||.||....|||||.||.|
RBAM_011520__ 351 CGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG 400
BSNT_01926___ 401 GCGATTTTGAGGATGTTATTTCTCTATCTAAATTGAACGTTAACGGAAGC 450
..||||||||||||.|.||.||.|||||.||||||||..|||||||||.|
RBAM_011520__ 401 ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATC 450
BSNT_01926___ 451 AAAACGACTTTATATTCGTTTGAGAACCGATATTATTTATATGTAGATTT 500
||||||||..|.|||||||||||..||||||||||||||||||.||||||
RBAM_011520__ 451 AAAACGACCCTGTATTCGTTTGAAGACCGATATTATTTATATGCAGATTT 500
BSNT_01926___ 501 TT----GCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTG 546
|| |||| ||||||||||||||||||||||||||||||||||||
RBAM_011520__ 501 TTATGAGCAA----ACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTG 546
BSNT_01926___ 547 CTGGAGTACGC-AACTGAATCCTCAATCAGCATACACCGTCTTGAAGAGT 595
.|||||||||| .|| |||||.|||.|||||||.||||||||||||||.|
RBAM_011520__ 547 TTGGAGTACGCGCAC-GAATCATCAGTCAGCATTCACCGTCTTGAAGAAT 595
BSNT_01926___ 596 ACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAGCGATAAAAAAACAC 645
|||||||..||.|.||..|.||.|||||..||.|..|.||||||||||||
RBAM_011520__ 596 ACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAAAACAC 645
BSNT_01926___ 646 TTTGCATCATAG 657
|||||||||||.
RBAM_011520__ 646 TTTGCATCATAA 657
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