Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_01957 and RBAM_011730

See Amino acid alignment / Visit BSNT_01957 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:42
# Commandline: needle
#    -asequence dna-align/BSNT_01957___fabI.1.9828.seq
#    -bsequence dna-align/RBAM_011730___fabI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01957___fabI-RBAM_011730___fabI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01957___fabI-RBAM_011730___fabI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01957___fabI
# 2: RBAM_011730___fabI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 777
# Identity:     638/777 (82.1%)
# Similarity:   638/777 (82.1%)
# Gaps:           0/777 ( 0.0%)
# Score: 2634.0
# 
#
#=======================================

BSNT_01957___      1 ATGAATTTTTCACTTGAAGGCCGCAACATTGTTGTGATGGGGGTAGCCAA     50
                     ||||||||.||||||||||||||||||||.|||||||||||.||.|||||
RBAM_011730__      1 ATGAATTTCTCACTTGAAGGCCGCAACATCGTTGTGATGGGCGTTGCCAA     50

BSNT_01957___     51 CAAACGCAGCATCGCCTGGGGCATTGCGCGTTCTTTACATGAAGCGGGTG    100
                     .||||||||.|||||.|||||.||.||.|||||..|.||||||||.||.|
RBAM_011730__     51 TAAACGCAGTATCGCATGGGGAATCGCCCGTTCGCTGCATGAAGCCGGAG    100

BSNT_01957___    101 CACGTTTGATTTTCACATACGCTGGTGAACGCCTGGAGAAATCCGTTCAC    150
                     |.||..|.||||||||.|||||.||.||.|||.||||.|||||.|||||.
RBAM_011730__    101 CGCGCCTCATTTTCACTTACGCGGGAGAGCGCTTGGAAAAATCAGTTCAT    150

BSNT_01957___    151 GAGCTTGCCGGAACATTAGACCGCAACGATTCCATCATCCTCCCTTGCGA    200
                     ||.|||||.|..||||||||..|.||.||||||||||||||.||.||.||
RBAM_011730__    151 GACCTTGCGGCTACATTAGAAAGAAATGATTCCATCATCCTTCCGTGTGA    200

BSNT_01957___    201 TGTTACAAACGACGCAGAAATCGAAACTTGCTTCGCAAGCATTAAGGAGC    250
                     |||.|||||.|||||.||.||||||.|||||||.||.||||||||.||||
RBAM_011730__    201 TGTGACAAATGACGCTGAGATCGAAGCTTGCTTTGCGAGCATTAAAGAGC    250

BSNT_01957___    251 AGGTCGGTGTTATCCACGGTATCGCGCATTGTATCGCGTTTGCCAACAAA    300
                     |||||||.||.||.|||||.||||||||.||.||||||||.||.||||||
RBAM_011730__    251 AGGTCGGCGTGATTCACGGCATCGCGCACTGCATCGCGTTCGCAAACAAA    300

BSNT_01957___    301 GAAGAGCTTGTGGGCGAATACTTAAACACAAATCGTGACGGCTTCCTTTT    350
                     |||||||||||.||||||||.|||||.||.||.||.||.||.|||||..|
RBAM_011730__    301 GAAGAGCTTGTCGGCGAATATTTAAATACGAACCGCGAAGGTTTCCTGCT    350

BSNT_01957___    351 GGCTCATAACATCAGCTCATATTCTCTGACTGCTGTTGTCAAAGCGGCAC    400
                     .||.|||||||||||.||.||.||||||||.||.||.|..||||||||.|
RBAM_011730__    351 TGCGCATAACATCAGTTCTTACTCTCTGACAGCGGTCGCAAAAGCGGCGC    400

BSNT_01957___    401 GTCCGATGATGACTGAAGGCGGAAGCATTGTCACTTTGACGTACCTTGGC    450
                     |||||||.||||||||||||||||||||.||.||..|.||.|||||.|||
RBAM_011730__    401 GTCCGATTATGACTGAAGGCGGAAGCATCGTTACACTCACTTACCTCGGC    450

BSNT_01957___    451 GGAGAGCTTGTGATGCCAAACTACAACGTCATGGGTGTAGCAAAAGCTTC    500
                     |||||||..||..|..|||||||.|||||.||||||||.||||||||.||
RBAM_011730__    451 GGAGAGCGCGTCGTTTCAAACTATAACGTAATGGGTGTGGCAAAAGCGTC    500

BSNT_01957___    501 TCTTGATGCAAGTGTGAAATATTTAGCTGCTGACTTAGGAAAAGAAAATA    550
                     |||||||||.||.||.|.|||||||||.||||||.|||||||||||||.|
RBAM_011730__    501 TCTTGATGCGAGCGTAAGATATTTAGCCGCTGACCTAGGAAAAGAAAACA    550

BSNT_01957___    551 TCCGCGTTAACAGCATTTCTGCCGGCCCGATCAGAACATTGTCTGCTAAA    600
                     |||||||.|||||||||||.||.||.||||||.|.||..|||||||.|||
RBAM_011730__    551 TCCGCGTCAACAGCATTTCAGCAGGACCGATCCGTACGCTGTCTGCAAAA    600

BSNT_01957___    601 GGCATCAGCGATTTCAACTCTATCTTAAAAGACATCGAAGAGCGTGCACC    650
                     ||.|||||.|||||||||||.|||.|.|||||.||.||||||||.||.||
RBAM_011730__    601 GGAATCAGTGATTTCAACTCCATCCTGAAAGAAATTGAAGAGCGCGCGCC    650

BSNT_01957___    651 GCTTCGCCGCACGACAACACCTGAAGAAGTGGGCGATACAGCTGCGTTCT    700
                     |||.||||||||||||||||||||||||||||||||.||.|||||.||||
RBAM_011730__    651 GCTGCGCCGCACGACAACACCTGAAGAAGTGGGCGACACGGCTGCATTCT    700

BSNT_01957___    701 TATTCAGCGATATGTCCCGCGGGATTACAGGTGAAAATCTTCACGTTGAT    750
                     |.|||||.||..||||..|.||.||.||.||.||||||||||||||||||
RBAM_011730__    701 TGTTCAGTGACCTGTCAAGAGGCATCACGGGCGAAAATCTTCACGTTGAT    750

BSNT_01957___    751 TCAGGTTTTCATATCACTGCCCGCTAA    777
                     |||||.||.|||||.||.||.||.|||
RBAM_011730__    751 TCAGGATTCCATATTACCGCACGTTAA    777


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.