Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01981 and RBAM_011930
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:44
# Commandline: needle
# -asequence dna-align/BSNT_01981___yjcI.1.9828.seq
# -bsequence dna-align/RBAM_011930___yjcI.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01981___yjcI-RBAM_011930___yjcI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01981___yjcI-RBAM_011930___yjcI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01981___yjcI
# 2: RBAM_011930___yjcI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1149
# Identity: 918/1149 (79.9%)
# Similarity: 918/1149 (79.9%)
# Gaps: 30/1149 ( 2.6%)
# Score: 3745.0
#
#
#=======================================
BSNT_01981___ 1 TTGAAAAGGGAAGGTGTCAGCTATATGTCACAGCACGTTGAAACGAAATT 50
|||.|.|||||.|||||.||.|||||
RBAM_011930__ 1 ------------------------ATGACGCAGCATGTTGATACAAAATT 26
BSNT_01981___ 51 AGCTCAAATTGGGAACCGTAGCGATGAAGTCACGGGAACAGTGAGTGCTC 100
|||.|||||.||.||..|.|||||.||||..||||||||.||.|||.|.|
RBAM_011930__ 27 AGCCCAAATCGGAAATAGAAGCGAAGAAGCAACGGGAACGGTCAGTCCGC 76
BSNT_01981___ 101 CTATCTATTTATCAACAGCATACCGCCACAGAGGGATCGGAGAATCTACC 150
|.||.|||.|.||.||.||.|||||.||.|||||.||.|||||||||||.
RBAM_011930__ 77 CGATTTATCTGTCCACCGCTTACCGACATAGAGGAATTGGAGAATCTACA 126
BSNT_01981___ 151 GGATTTGATTATGTCCGCACAAAAAATCCGACACGCCAGCTTGTTGAGGA 200
||.|||||||||||.||.||.|||||.||||||||||||||.|||||.||
RBAM_011930__ 127 GGCTTTGATTATGTGCGTACGAAAAACCCGACACGCCAGCTCGTTGAAGA 176
BSNT_01981___ 201 CGCGATCGCTAACTTAGAAAACGGCGCGAGAGGGCTTGCCTTTAGTTCGG 250
|||.|||||....||.||||||||.||||||||..||||.||.||.||||
RBAM_011930__ 177 CGCTATCGCCGTGTTGGAAAACGGTGCGAGAGGCTTTGCTTTCAGCTCGG 226
BSNT_01981___ 251 GAATGGCTGCTATCCAAACGATTATGGCGCTGTTTAAAAGCGGAGATGAA 300
|||||||.||.||.||||||||||||||..|.||||||||||||||||||
RBAM_011930__ 227 GAATGGCAGCCATTCAAACGATTATGGCTTTATTTAAAAGCGGAGATGAA 276
BSNT_01981___ 301 CTGATCGTTTCATCGGACCTATATGGCGGCACGTACCGTTTATTTGAAAA 350
.||||.||.||.||.||..||||.||.||||||||||||||.||||||||
RBAM_011930__ 277 TTGATTGTATCCTCCGATTTATACGGAGGCACGTACCGTTTGTTTGAAAA 326
BSNT_01981___ 351 TGAATGGAAAAAATACGGATTGACTTTTCATTATGATGATTTCAGCGATG 400
.|||||||.|||||||||.||.|..|||..|||.||||||||||||||||
RBAM_011930__ 327 CGAATGGAGAAAATACGGCTTAAGCTTTATTTACGATGATTTCAGCGATG 376
BSNT_01981___ 401 AGGACTGTTTACGCTCTAAGATTACGCCGAATACA--AAAGCGGTGTTTG 448
|.||||||||||||||.||.||.||| |||.||| ||||||||.||||
RBAM_011930__ 377 AAGACTGTTTACGCTCCAAAATAACG--GAAAACACGAAAGCGGTATTTG 424
BSNT_01981___ 449 TGGAAACGCCGACAAACCCCCTTATGCAGGAGGCGGACATTGAACATATT 498
|.|||||||||||||||||..|.|||||||||||||||||||||.|.||.
RBAM_011930__ 425 TTGAAACGCCGACAAACCCGTTAATGCAGGAGGCGGACATTGAAAAAATC 474
BSNT_01981___ 499 GCCCGGATTAC-AAAGGAGCACGGTCTTCTGCTGATTGTAGATAATACAT 547
||||||||||| ||||.||| |||.||.||..|||||||.||||||||.|
RBAM_011930__ 475 GCCCGGATTACGAAAGAAGC-CGGCCTGCTTTTGATTGTGGATAATACGT 523
BSNT_01981___ 548 TTTATACACCGGTCTTGCAGCGGCCGCTTGAGCTGGGAGCTGACATTGTC 597
|||||||.|||||..|.|||||.||||||||.||||||||.|||||.|||
RBAM_011930__ 524 TTTATACCCCGGTGCTCCAGCGTCCGCTTGAACTGGGAGCGGACATCGTC 573
BSNT_01981___ 598 ATTCACAGCGCAACCAAGTATTTAGGCGGGCATAACGATCTGCTTGCTGG 647
|||||||||||.||.||.||||||||||||||.||.|||||.|||||.||
RBAM_011930__ 574 ATTCACAGCGCCACAAAATATTTAGGCGGGCACAATGATCTCCTTGCCGG 623
BSNT_01981___ 648 ACTTGTCGTGGTGAAGGATGAGCGGCTCGGAGAGGAAATGTTTCAGCATC 697
.||||..||.||.||||||||...||||||.|||...||||||.|.||.|
RBAM_011930__ 624 TCTTGCTGTCGTAAAGGATGAAGAGCTCGGCGAGATCATGTTTAATCACC 673
BSNT_01981___ 698 AAAATGCAATCGGCGCCGTCCTGCCGCCATTTGATTCGTGGCTTCTGATG 747
|||||||.|||||.|||||.||.|||||.|||||||||||||||.|.|||
RBAM_011930__ 674 AAAATGCGATCGGAGCCGTTCTCCCGCCGTTTGATTCGTGGCTTTTAATG 723
BSNT_01981___ 748 AGAGGAATGAAGACGCTGAGCCTCAGAATGCGTCAGCATCAGGCAAACGC 797
|||||.|||||.||.||..|.|||||||||||.|..|||.|.|.||||||
RBAM_011930__ 724 AGAGGGATGAAAACACTCGGACTCAGAATGCGCCGTCATGAAGAAAACGC 773
BSNT_01981___ 798 GCAGGAGCTTGCGGCGTTTTTAGAAGAGCAGGAAGAAATTTCGGATGTGC 847
.|..||.|||||||..|||||||||.||.|.||||||||..|.||||||.
RBAM_011930__ 774 CCGTGAACTTGCGGAATTTTTAGAACAGGAAGAAGAAATCGCCGATGTGT 823
BSNT_01981___ 848 TGTATCCCGGAAAAGGCGGCATGCTGTCCTTCCGTCTGCAAAAAGAAGAA 897
|.|||||||||||||||||.||||||||.|||||.|||||||||||.|||
RBAM_011930__ 824 TATATCCCGGAAAAGGCGGGATGCTGTCTTTCCGGCTGCAAAAAGAGGAA 873
BSNT_01981___ 898 TGGGTCAATCCGTTTTTAAAAGCACTGAAGACCATTTGTTTTGCAGAAAG 947
||||||||||||||||||||.||.|||||.||.||.|||||.||||||||
RBAM_011930__ 874 TGGGTCAATCCGTTTTTAAAGGCGCTGAAAACGATCTGTTTCGCAGAAAG 923
BSNT_01981___ 948 CCTCGGCGGGGTGGAAAGCTTTATTACATACCCTGCGACCCAGACGCACA 997
.||||||||||||||||||||||||||||||||.|||||.||||||||||
RBAM_011930__ 924 TCTCGGCGGGGTGGAAAGCTTTATTACATACCCCGCGACACAGACGCACA 973
BSNT_01981___ 998 TGGATATTCCTGAAGAGATCCGCATCGCAAACGGGGTGTGCAATCGGTTG 1047
||||.|||||.|||||.|||||.|||||||||||.||.|||||.||..||
RBAM_011930__ 974 TGGACATTCCGGAAGACATCCGTATCGCAAACGGTGTCTGCAACCGTCTG 1023
BSNT_01981___ 1048 CTGCGCTTTTCTGTCGGTATTGAACATGCGGAAGATTTAAAAGAGGATCT 1097
|||.|.|||||.||.||.|||||||||||.||||||||.||...||||.|
RBAM_011930__ 1024 CTGAGATTTTCAGTGGGCATTGAACATGCAGAAGATTTGAAGCGGGATGT 1073
BSNT_01981___ 1098 AAAACAGGCATTATGTCAGGTCAAAGAGGGAGCTGTTTCTTTTGAGTAA 1146
|||.|||||||||...||.||.||||||||.||.||.||.|.|||||||
RBAM_011930__ 1074 AAAGCAGGCATTACAGCAAGTAAAAGAGGGGGCCGTGTCATATGAGTAA 1122
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