Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02112 and RBAM_012480

See Amino acid alignment / Visit BSNT_02112 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:49
# Commandline: needle
#    -asequence dna-align/BSNT_02112___yjqA.1.9828.seq
#    -bsequence dna-align/RBAM_012480___yjqA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02112___yjqA-RBAM_012480___yjqA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02112___yjqA-RBAM_012480___yjqA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02112___yjqA
# 2: RBAM_012480___yjqA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 378
# Identity:     323/378 (85.4%)
# Similarity:   323/378 (85.4%)
# Gaps:           0/378 ( 0.0%)
# Score: 1395.0
# 
#
#=======================================

BSNT_02112___      1 ATGGGGTTTATTGATGGATTACTCGGCAATGCGTCAACACTGTCAACGGC     50
                     |||||.||.||..|||||||.||.|||||||||||.|||.|.||.|||||
RBAM_012480__      1 ATGGGATTCATCAATGGATTGCTGGGCAATGCGTCGACAATATCGACGGC     50

BSNT_02112___     51 TGCTGTAAAAGAAGAGCTTGCTCATATTTTACTTGAGGGTGAGAAGGTTG    100
                     ||..|.|||||.|||.||.||||.||||.|.||.||.||||||||.||..
RBAM_012480__     51 TGAAGCAAAAGCAGAACTGGCTCGTATTCTGCTGGAAGGTGAGAATGTCA    100

BSNT_02112___    101 AAGCCGCGTTTAAGCTGGTTCGCGATTTGATTGTCTTCACTGACAAGCGG    150
                     |.|||||.||||||||.||.||.|||.|.||||||||.||.||.|||||.
RBAM_012480__    101 ACGCCGCATTTAAGCTTGTCCGAGATATCATTGTCTTTACGGATAAGCGT    150

BSNT_02112___    151 CTTATTCTTGTGGACAAGCAGGGAATCACAGGCAAGAAAACGGAGTTTCA    200
                     |||||||||||.||.||.||||||.|||||||.||||||||||||.||||
RBAM_012480__    151 CTTATTCTTGTTGATAAACAGGGACTCACAGGGAAGAAAACGGAGATTCA    200

BSNT_02112___    201 ATCGATTCCGTACAAAAGCATTTCCAGATTCAGCGTGGAAACGGCCGGCC    250
                     |||.|||||||||||.||||||||||||||||||||.|||||.|||||||
RBAM_012480__    201 ATCCATTCCGTACAAGAGCATTTCCAGATTCAGCGTAGAAACCGCCGGCC    250

BSNT_02112___    251 GCTTTGACCTCGATTCAGAGCTGAAAATTTGGATCTCCGGCGCAGAGCTT    300
                     ||||||||||.|||||||||||||||||||||||.||.|||||.||.|||
RBAM_012480__    251 GCTTTGACCTTGATTCAGAGCTGAAAATTTGGATTTCAGGCGCGGAACTT    300

BSNT_02112___    301 CCTGCCGTCTCAAAGCAGTTTAAAAAAGATGAGAGCATTTATGATATTCA    350
                     ||.||.||||||||||||||||||||||||||.|||||||||||||||||
RBAM_012480__    301 CCCGCTGTCTCAAAGCAGTTTAAAAAAGATGAAAGCATTTATGATATTCA    350

BSNT_02112___    351 AAAGGTGCTTGCCGCAGTTTGTATGTAA    378
                     |||||..|||||||||||||||||||||
RBAM_012480__    351 AAAGGCCCTTGCCGCAGTTTGTATGTAA    378


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