Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02120 and RBAM_012540
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:50
# Commandline: needle
# -asequence dna-align/BSNT_02120.1.9828.seq
# -bsequence dna-align/RBAM_012540___xkdC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02120-RBAM_012540___xkdC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02120-RBAM_012540___xkdC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02120
# 2: RBAM_012540___xkdC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 817
# Identity: 460/817 (56.3%)
# Similarity: 460/817 (56.3%)
# Gaps: 209/817 (25.6%)
# Score: 1538.0
#
#
#=======================================
BSNT_02120 0 -------------------------------------------------- 0
RBAM_012540__ 1 ATGACAAAACGAACGATCGAGCAGATACTGGCCGACCTGAAAAACGGAAA 50
BSNT_02120 0 -------------------------------------------------- 0
RBAM_012540__ 51 ACGTCCATTACTGGCGGACAGACCGGAAGAATCAGACGAAAGCCGCTTTG 100
BSNT_02120 0 -------------------------------------------------- 0
RBAM_012540__ 101 ACTGTCCGCTCTGTAAAGATCAGGGCGGTTACCTCAAAAACCAGCTGGGA 150
BSNT_02120 1 -----------------------ATG----GCAGAACGGAAAGTGAAGCG 23
.|| ||.|||||.||||...||||
RBAM_012540__ 151 TTGGATGTGTGGGTTAAGTGCCGCTGCGCCGCCGAACGAAAAGCAGAGCG 200
BSNT_02120 24 GCTGCTGGGTGCAAGTGAGATTACCCACG-CTTTCAGACAGCTCGGCTTC 72
..|.||..|.||||||||||||||...|| ||||| ||.||||.|..|||
RBAM_012540__ 201 CATCCTCAGCGCAAGTGAGATTACAGGCGCCTTTC-GAAAGCTGGATTTC 249
BSNT_02120 73 AAGGAATTCCGCACGGAGGGAAAGCCGCAGGCCATAAAAGACGCATTTGA 122
||.|.|||...||||..|||.|||||.|||||..|....|||||||.|||
RBAM_012540__ 250 AAAGGATTTATCACGCGGGGCAAGCCTCAGGCAGTCGTCGACGCATATGA 299
BSNT_02120 123 GTG------TATAAAAGAGTATGTTGCCGATTATGAACAA-ATCAAGGAT 165
||| | ||.|||||||...|.| |..|||| ||.||..|.
RBAM_012540__ 300 GTGCGCCCTT------GAATATGTTGAAAACT-TCGACAAGATTAAAAAC 342
BSNT_02120 166 TGCCGAAAAAACAGCATTGCCCTTTTAGGACAGCCCGGATCAGGGAAAAC 215
|||||.|||||||||||||||||||||||.|..||.||.||.||.|||||
RBAM_012540__ 343 TGCCGGAAAAACAGCATTGCCCTTTTAGGGCGTCCGGGGTCGGGAAAAAC 392
BSNT_02120 216 ACACCTTTTGACTGCCGCTGCCAACGAATTA----ATGAGA-ACATGCTA 260
.||.||||||| |||||..||.| ||||| |||||| |.|||| |
RBAM_012540__ 393 CCATCTTTTGA---CCGCTCTCAGC-AATTATGTCATGAGACAGATGC-A 437
BSNT_02120 261 TGTGCCTGTCATTTATTTTCCGTTCGTGGAAGGCTTTACTGATCTGAAAA 310
....||.||..|.||||||||.||.|||||.||||||||.|||.|.||||
RBAM_012540__ 438 GACACCCGTGCTGTATTTTCCTTTTGTGGAGGGCTTTACGGATTTAAAAA 487
BSNT_02120 311 ATGATTTTGCCCTATTAGAAGCGAAGCTGAACCGGATGAAGCAGGCGGAT 360
|||||||||..||..|.||.|..|||||...|||.|||||.|||||||||
RBAM_012540__ 488 ATGATTTTGATCTGCTTGATGAAAAGCTTGGCCGTATGAAACAGGCGGAT 537
BSNT_02120 361 GTGCTGTTCATAGATGACCTGTTTAAACCGGTTAACGGCAAACCCCGCGC 410
|||||.||.||.||.||.|||||.||||||.|.|||||.||||||||.||
RBAM_012540__ 538 GTGCTTTTTATTGACGATCTGTTCAAACCGCTGAACGGAAAACCCCGGGC 587
BSNT_02120 411 TACAGATTGGCA-ATTAGAGCAAATGTATTCGGTACTCAACTATCGCTAC 459
.||.|||||||| ||| ||.||||||||..|.||..|.||.||.|||||.
RBAM_012540__ 588 GACCGATTGGCAGATT-GAACAAATGTACGCCGTCGTAAATTACCGCTAT 636
BSNT_02120 460 TTAAATCATAAACCGATTTTGCTTTCGAGCGAGCTGACAATTGAAGCACT 509
|||||||||||.|||.||.|..|.||||||||||||.|...|||.|.|||
RBAM_012540__ 637 TTAAATCATAAGCCGGTTCTTATCTCGAGCGAGCTGGCCTGTGACGGACT 686
BSNT_02120 510 TGTACGGGTCGATGAAGCGCTCGGCACGAGAATCTATGAGATGTGCAGTG 559
.||.|.|||.||||||||..|.|||||.|||||.||||||||||||||.|
RBAM_012540__ 687 GGTGCAGGTTGATGAAGCCTTGGGCACAAGAATTTATGAGATGTGCAGCG 736
BSNT_02120 560 ACTATTTAGTGATTATCAAAGGAGCA--GCCTACGAGCTTAACCATAGAT 607
|.||||||||.||.||.||.| ||| .|.|..||..|.|||||.||||
RBAM_012540__ 737 ATTATTTAGTCATCATTAATG--GCAATTCATTTGACGTAAACCACAGAT 784
BSNT_02120 608 TGGAGGGCGTCAGATAA 624
|.|||||.|..||||||
RBAM_012540__ 785 TAGAGGGGGCGAGATAA 801
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