Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02125 and RBAM_012570
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:50
# Commandline: needle
# -asequence dna-align/BSNT_02125___xtrA.1.9828.seq
# -bsequence dna-align/RBAM_012570___xtrA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02125___xtrA-RBAM_012570___xtrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02125___xtrA-RBAM_012570___xtrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02125___xtrA
# 2: RBAM_012570___xtrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 211
# Identity: 162/211 (76.8%)
# Similarity: 162/211 (76.8%)
# Gaps: 11/211 ( 5.2%)
# Score: 595.5
#
#
#=======================================
BSNT_02125___ 1 ATGATTCATCCTAAAAAACTG-CTGCATATCGA--TTCCATCACGCTTA- 46
|||| |||||||||||||| ||| |.||.|| .|.||.|| |||
RBAM_012570__ 1 ATGA---ATCCTAAAAAACTGACTG-ACATTGAACATACAACA---TTAC 43
BSNT_02125___ 47 AGAGCCAGCTGGAGGAAGGGAAAATCCGTGTCATTATTGTGGATGGCATC 96
|.|||||||||||.|||||.||..|.||.|||||.|||||.||.||..|.
RBAM_012570__ 44 AAAGCCAGCTGGAAGAAGGAAAGGTGCGGGTCATCATTGTAGACGGACTG 93
BSNT_02125___ 97 AAGCAAGAAGCATGGATCACAGAAGCGCCCGAGCATGGAAAAACGCTCGT 146
|||.|.|||||||||.||.|.||||||||.|||||.||.||||||||.||
RBAM_012570__ 94 AAGAAGGAAGCATGGCTCGCCGAAGCGCCGGAGCACGGCAAAACGCTTGT 143
BSNT_02125___ 147 CGAAACAAGAAAGGGCGATCTTGCCCGTGTGGAATTTGAAATCGGCTACA 196
||||||..||||.||.|||||.|||||.||.||||.|||||||||||..|
RBAM_012570__ 144 CGAAACGCGAAAAGGGGATCTGGCCCGGGTCGAATATGAAATCGGCTTTA 193
BSNT_02125___ 197 AATTAAATTAA 207
||||.||||||
RBAM_012570__ 194 AATTGAATTAA 204
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