Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02167 and RBAM_012660
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:50
# Commandline: needle
# -asequence dna-align/BSNT_02167___xlyA.1.9828.seq
# -bsequence dna-align/RBAM_012660___xlyA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02167___xlyA-RBAM_012660___xlyA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02167___xlyA-RBAM_012660___xlyA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02167___xlyA
# 2: RBAM_012660___xlyA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 926
# Identity: 639/926 (69.0%)
# Similarity: 639/926 (69.0%)
# Gaps: 79/926 ( 8.5%)
# Score: 2193.0
#
#
#=======================================
BSNT_02167___ 1 ATGGTTAACATTATTCAAGACTTTATTCCGGTTGGCGCAAATAACCGTCC 50
|||||.||.||.|..||.||.|||||.||||..||....||||||||.||
RBAM_012660__ 1 ATGGTAAAGATCACACAGGATTTTATCCCGGCAGGAAACAATAACCGCCC 50
BSNT_02167___ 51 AGGCTACGCAATGACGCCGCTTTACATTACGGTGCACAATACAGCGAATA 100
||||||.||||||||.|||.|||||||||||||||||||||||||.||||
RBAM_012660__ 51 AGGCTATGCAATGACACCGATTTACATTACGGTGCACAATACAGCCAATA 100
BSNT_02167___ 101 CCGCAGTAGGGGCAGATGCTGCGGCC------CATGCCCGCTATTTGAAA 144
|.|||||.|| .|||...||| ||.||..|||||.|||||
RBAM_012660__ 101 CTGCAGTCGG------AGCTAACGCCAAAAGTCACGCAAGCTATGTGAAA 144
BSNT_02167___ 145 AATCCTGATACGACGACAAGCTGGCATTTTACAGTTGATGATACAGAAAT 194
|||||.|||||..||||||||||||||||.|||||.||||||||.|||||
RBAM_012660__ 145 AATCCCGATACACCGACAAGCTGGCATTTCACAGTCGATGATACGGAAAT 194
BSNT_02167___ 195 TTATCAGCATCTGCCTTTGAATGAAAACGGCTGGCATGCGGGAGACGGAA 244
||||||||||||.||..||||.|||||||||||||||||.||.|||||||
RBAM_012660__ 195 TTATCAGCATCTTCCGCTGAACGAAAACGGCTGGCATGCCGGTGACGGAA 244
BSNT_02167___ 245 ATGGCAGCGGCAACCGGGCTTCTATCGGAATTGAAATTTGCGAAAATGCT 294
|.||...|||||||||....||.|||||.|||||||||||.|||||.||.
RBAM_012660__ 245 ACGGGGACGGCAACCGTAAATCCATCGGTATTGAAATTTGTGAAAACGCA 294
BSNT_02167___ 295 GATGGAGATTTTGCAAAAGCAACAGCAAATGCCCAGTGGCTCATCAAAAC 344
||.||..|.|||.||.|.||....|||||.|||||.|||||||||...||
RBAM_012660__ 295 GACGGCAACTTTTCACAGGCCGTGGCAAACGCCCAATGGCTCATCCGCAC 344
BSNT_02167___ 345 ATTAAT----------GGCTGAACATAATATCAGTCTCGCCAATGTCGTC 384
|||||| ||| |||...||.||.||||||||.
RBAM_012660__ 345 ATTAATGACCTCTCACGGC----------ATCCCGCTTGCAAATGTCGTT 384
BSNT_02167___ 385 CCTCATAAGTATTGGTCAGGGAAGGAATGTCCGCGAAAATTATTAGATAC 434
.|.||.|||.||||||||||.|||...||||||.|||.|.|.||.|||||
RBAM_012660__ 385 GCGCACAAGCATTGGTCAGGAAAGCTTTGTCCGAGAAGACTGTTGGATAC 434
BSNT_02167___ 435 GTGGGATTCGTTCAAAGCAGGAAT------TGGGGGAGGCGGCAGCCAAA 478
.||||||..|||.|||||.||||| |||||.| ||.||.|
RBAM_012660__ 435 ATGGGATGAGTTTAAAGCGGGAATCGGTTCTGGGGAA------AGACAGA 478
BSNT_02167___ 479 CTTACGTCGTGAAACAGGGCGACACGCTTACATCGATAGCGAGAGCATTT 528
|.||...|||..||.|.||.||.|||||..||.||||.|||.|...|||.
RBAM_012660__ 479 CGTATACCGTCCAAAAAGGAGATACGCTGTCAGCGATCGCGCGGAAATTC 528
BSNT_02167___ 529 GGTGTTACGGTTGCTCAGCTGCAAGAGTGGAACAATATCGAAGACCCGAA 578
||.||.|..||.||..|.|||||..|.|||||.||.||||..||||||||
RBAM_012660__ 529 GGCGTCAGCGTGGCCGATCTGCAGAAATGGAATAACATCGCTGACCCGAA 578
BSNT_02167___ 579 TCTTATTCGCGTTGGTCAAGTATTAATTGTAAGTGCTCCATCGTCCGCTG 628
.||.|||...||.||.||||||.|.||.||.|| || ||.|.|.||
RBAM_012660__ 579 CCTGATTAAAGTCGGACAAGTACTGATCGTCAG----CC--CGCCGGTTG 622
BSNT_02167___ 629 AAGAACCCGAGCTCTATCCGCTCCCTGATGGTATCATTCAATTGACAACA 678
|||.| ||.|||.|.||.||.||.|...|.|||||..|||||...
RBAM_012660__ 623 AAGCA------CTGTATTCTCTTCCGGACGAGGTGATTCAGCTGACAGAG 666
BSNT_02167___ 679 CCTTATACCTCAGGAGAACACGTCTTTCAGGTGCAACGAGCACTTGCGGC 728
||.||.||.||.||.|||.|.||.|..|||||||||...||.||.||.||
RBAM_012660__ 667 CCGTACACGTCCGGCGAAAAGGTATACCAGGTGCAAAACGCGCTCGCCGC 716
BSNT_02167___ 729 TCTGTATTTTTACCCTGATAAAGGCGCTGTTAACAACGGAATTGACGGCG 778
.||.|||||.||.|||||.|||||.|||||.||.||||||||||||||..
RBAM_012660__ 717 GCTTTATTTCTATCCTGAAAAAGGAGCTGTCAATAACGGAATTGACGGTA 766
BSNT_02167___ 779 TTTACGGACCGAAAACAGCTGACGCAGTTGCCCGTTTTCAGTCTGTTAAC 828
|.|||||.||||||||.||.||.||.||.|||||.||.||.|||||.|||
RBAM_012660__ 767 TCTACGGTCCGAAAACCGCAGATGCCGTGGCCCGCTTCCAATCTGTAAAC 816
BSNT_02167___ 829 GGTTTAACTG----CTGACGGTATCTATGGGCCTGCGACGAAAGCGAA-- 872
|| |||| |||||||..||||.||.||.||....||||||||
RBAM_012660__ 817 GG----ACTGACGTCTGACGGCGTCTACGGCCCCGCTGTAAAAGCGAAAA 862
BSNT_02167___ 873 ----GATCGCAGCGCAATTAAGCTGA 894
||| ||||| .||||
RBAM_012660__ 863 TTCTGAT-GCAGC---TTTAA----- 879
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