Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02238 and RBAM_013130
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:56
# Commandline: needle
# -asequence dna-align/BSNT_02238___tnrA.1.9828.seq
# -bsequence dna-align/RBAM_013130___tnrA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02238___tnrA-RBAM_013130___tnrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02238___tnrA-RBAM_013130___tnrA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02238___tnrA
# 2: RBAM_013130___tnrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity: 272/333 (81.7%)
# Similarity: 272/333 (81.7%)
# Gaps: 0/333 ( 0.0%)
# Score: 1116.0
#
#
#=======================================
BSNT_02238___ 1 ATGACCACAGAAGATCATTCTTATAAAGACAAAAAAGTGATTTCAATCGG 50
|||||.|||||.||.||.|||||.|||||.||||||||.||.||.|||||
RBAM_013130__ 1 ATGACGACAGACGAACAATCTTACAAAGATAAAAAAGTAATCTCGATCGG 50
BSNT_02238___ 51 AATTGTGAGTGAATTGACAGGATTGTCCGTAAGACAGATCAGGTATTATG 100
.|||||.||.|||||.||.||||||||.||.|||||||||||.||.||||
RBAM_013130__ 51 CATTGTAAGCGAATTAACCGGATTGTCAGTCAGACAGATCAGATACTATG 100
BSNT_02238___ 101 AGGAACGAAAGCTCATTTACCCGCAGCGTTCTTCAAGGGGGACAAGAAAA 150
|.|||||.||..|.||.||.|||||||||||.|||.||||.||.|||||.
RBAM_013130__ 101 AAGAACGGAAATTAATCTATCCGCAGCGTTCATCACGGGGAACGAGAAAG 150
BSNT_02238___ 151 TACTCCTTTGCCGATGTGGAGCGGCTGATGGATATCGCCAATAAGCGTGA 200
||.|||||.||.||.||.|||||||||||||||||.|||||.|||||.||
RBAM_013130__ 151 TATTCCTTCGCGGACGTTGAGCGGCTGATGGATATTGCCAACAAGCGGGA 200
BSNT_02238___ 201 AGACGGCGTACAGACGGCAGAGATTTTAAAGGATATGCGCAAAAAAGAAC 250
|||||||||.||||||||.|||||||||||.||.|||||.||||||||||
RBAM_013130__ 201 AGACGGCGTGCAGACGGCTGAGATTTTAAAAGACATGCGAAAAAAAGAAC 250
BSNT_02238___ 251 AGATGTTAAAAAACGATCCGCAAGTGCGGAAAAAAATGCTGGAGGGGCAG 300
||....|.||||||||.|||||..|.||.||||||||||||||.||.|||
RBAM_013130__ 251 AGGCTCTCAAAAACGACCCGCAGCTCCGCAAAAAAATGCTGGAAGGACAG 300
BSNT_02238___ 301 CTTAATGCTCACTTTCGGTACAAAAACCGTTAA 333
|||||||||||.|||..|||.||||||||.|.|
RBAM_013130__ 301 CTTAATGCTCATTTTAAGTATAAAAACCGCTGA 333
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