Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02267 and RBAM_013240
See
Amino acid alignment /
Visit
BSNT_02267 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:57
# Commandline: needle
# -asequence dna-align/BSNT_02267___sspD.1.9828.seq
# -bsequence dna-align/RBAM_013240___sspD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02267___sspD-RBAM_013240___sspD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02267___sspD-RBAM_013240___sspD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02267___sspD
# 2: RBAM_013240___sspD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 195
# Identity: 171/195 (87.7%)
# Similarity: 171/195 (87.7%)
# Gaps: 0/195 ( 0.0%)
# Score: 759.0
#
#
#=======================================
BSNT_02267___ 1 ATGGCGAGCAGAAATAAACTCGTTGTTCCAGGGGTGGAGCAGGCACTAGA 50
|||||||||||||||||||||.|.||||||||||..|||||||||||.||
RBAM_013240__ 1 ATGGCGAGCAGAAATAAACTCTTAGTTCCAGGGGCTGAGCAGGCACTTGA 50
BSNT_02267___ 51 CCAATTTAAACTCGAAGTGGCTCAAGAATTCGGTGTGAACCTTGGTTCTG 100
||||||||||..|||||||||||||||||||||.|||||||||.|.||||
RBAM_013240__ 51 CCAATTTAAATACGAAGTGGCTCAAGAATTCGGCGTGAACCTTAGCTCTG 100
BSNT_02267___ 101 ATACAGTCGCACGCGCTAACGGCTCTGTAGGCGGAGAAATGACAAAGCGG 150
||||||..||||||||.|||||||||||||||||.|||||||||||.||.
RBAM_013240__ 101 ATACAGCAGCACGCGCAAACGGCTCTGTAGGCGGGGAAATGACAAAACGT 150
BSNT_02267___ 151 CTGGTACAGCAAGCACAATCACAATTAAATGGCACAACTAAATAA 195
||.||||||||.||.||||||||||||||.||.|.||.|.|||||
RBAM_013240__ 151 CTTGTACAGCAGGCTCAATCACAATTAAACGGGAAAAATCAATAA 195
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.