Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02289 and RBAM_013390
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:59
# Commandline: needle
# -asequence dna-align/BSNT_02289___mtnB.1.9828.seq
# -bsequence dna-align/RBAM_013390___mtnB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02289___mtnB-RBAM_013390___mtnB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02289___mtnB-RBAM_013390___mtnB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02289___mtnB
# 2: RBAM_013390___mtnB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 639
# Identity: 465/639 (72.8%)
# Similarity: 465/639 (72.8%)
# Gaps: 18/639 ( 2.8%)
# Score: 1673.0
#
#
#=======================================
BSNT_02289___ 1 ATGGCTGCAAAACAAGAACGCTGGCGAGAGCTCGCTGAAGTAAAACGGGA 50
||||||||||||.|||||||||||||.||.||.||.||.||||||||.||
RBAM_013390__ 1 ATGGCTGCAAAAGAAGAACGCTGGCGCGAACTTGCCGAGGTAAAACGCGA 50
BSNT_02289___ 51 ATTGGCAGAGAGAGATTGGTTTCCGGCGACTAGCGGTAATCTGTCAATTA 100
..||||.||.|||||.|||||.|||||.||.|||||.|||||.||.||.|
RBAM_013390__ 51 GCTGGCTGAAAGAGACTGGTTCCCGGCAACGAGCGGGAATCTTTCCATCA 100
BSNT_02289___ 101 AGGTTACAGATGAGCCTTTAACATTTCTCGTCACTGCAAGCGGAAAAGAT 150
|.||..|.||.|.|||..|.||.||||||||.||.||.|||||||||||.
RBAM_013390__ 101 AAGTATCCGACGGGCCGCTGACTTTTCTCGTTACGGCGAGCGGAAAAGAC 150
BSNT_02289___ 151 AAACGTAAAGAGACGGTTGAAGATTTTCTGCTGGTCGATCAAAACGGAGA 200
|||||.|||||.||.|..|||||||||||..|..|||||.|..||||..|
RBAM_013390__ 151 AAACGAAAAGAAACAGACGAAGATTTTCTCTTAATCGATGAGTACGGGAA 200
BSNT_02289___ 201 GCCTGCTGAAAGCGGGCATTCTCTGAAACCGTCAGCAGAAACGCTTTTGC 250
|||.|||||.|.|||.||||||.|.|||||.|||||.|||||||||.|.|
RBAM_013390__ 201 GCCCGCTGAGACCGGCCATTCTTTAAAACCTTCAGCGGAAACGCTTCTCC 250
BSNT_02289___ 251 ATACACATTTGTACAATAAAACCAATGCCGGATGCTGCCTGCATGTCCAT 300
||||..|.||.|||.|.||.||..|.||.||.|||||.||||||||||||
RBAM_013390__ 251 ATACTTACTTATACCAAAAGACAGACGCGGGCTGCTGTCTGCATGTCCAT 300
BSNT_02289___ 301 ACGGTAAACAATAATGTGATTTCAGAGTTATACGGAGACCAAAAGAAAAT 350
||.||.||.||||||||.||.||||||.|.|||||.||..||||..||||
RBAM_013390__ 301 ACCGTCAATAATAATGTCATCTCAGAGCTTTACGGGGATGAAAAACAAAT 350
BSNT_02289___ 351 GACATTCAAAGGCCAGGAAATTATAAAAGCACTCGGCTTGTGGGAAGAGA 400
.||.||..|.||.|||||.||.||.||.||.|||||.||.|||||.||.|
RBAM_013390__ 351 CACTTTTCAGGGGCAGGAGATGATTAAGGCGCTCGGATTATGGGAGGAAA 400
BSNT_02289___ 401 ACGCAGAAGTGACCGTTCCGATTATAGAAAATGCGGCACATATCCCGACG 450
||||....||||||||||||||.||.||.|||.||||.|||||||||.|.
RBAM_013390__ 401 ACGCGTCCGTGACCGTTCCGATCATTGACAATCCGGCGCATATCCCGGCA 450
BSNT_02289___ 451 CTAGCGGCACTGTT---------TGCGGAAGAGATTTCAGAAGATTCAGG 491
.|.||.|.|...|| ||||| |.|..|..|||||
RBAM_013390__ 451 TTGGCCGAAAACTTCGCGCACCATGCGG---------CCGCCGGCTCAGG 491
BSNT_02289___ 492 AGCTGTTCTGATCCGAAATCATGGTATTACGGCTTGGGGGAAAACAGCAT 541
.||.||..|.|||||.|||||.||.||||||||.||||||...||.||||
RBAM_013390__ 492 CGCGGTGTTAATCCGCAATCACGGCATTACGGCATGGGGGCGGACCGCAT 541
BSNT_02289___ 542 TTGAGGCAAAAAGAGTGCTTGAAGCGTATGAATTTTTGTTCAGCTACCAT 591
||||.||.|||||.|||||.|||||.|||||||||||.|||||||..||.
RBAM_013390__ 542 TTGAAGCGAAAAGGGTGCTGGAAGCCTATGAATTTTTATTCAGCTGTCAC 591
BSNT_02289___ 592 TTGAAATTGAAAACACTCCAGCATCAGCTGGTTAAATAA 630
.|.||..|.....||||.|.||..||||||||.||||||
RBAM_013390__ 592 CTCAAGCTTCTGTCACTTCGGCCGCAGCTGGTAAAATAA 630
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