Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02312 and RBAM_013580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence dna-align/BSNT_02312.1.9828.seq
# -bsequence dna-align/RBAM_013580.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02312-RBAM_013580.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02312-RBAM_013580.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02312
# 2: RBAM_013580
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 199
# Identity: 154/199 (77.4%)
# Similarity: 154/199 (77.4%)
# Gaps: 5/199 ( 2.5%)
# Score: 590.0
#
#
#=======================================
BSNT_02312 1 TTGTTGCGACCCGAAGAAATAACAGAAATGATTGAACAGCTGCGCACCGG 50
||||..||.||.|||||..|||||...||..|.||..||||||||||
RBAM_013580 1 ---TTGCTGCCTGAGGAAATTTCAGAACGTATCAACCAAATGCGCACCGG 47
BSNT_02312 51 CGCCATAAACGAACTGAGAGTCCAGAAAGAGCATTTTCTTG-ATTTCAGG 99
.|..||.||.|||.|.||.||.||||||||.|||||||||| ||||| |.
RBAM_013580 48 TGAAATCAAAGAATTCAGGGTGCAGAAAGAACATTTTCTTGCATTTC-GA 96
BSNT_02312 100 GCCGTGTTATCTAAACAAGATGATTTTAAACATTTCCGAGGAATTGCCCA 149
||.||.|||||.||.||.||.||||||||.||||||||.||.|||||.||
RBAM_013580 97 GCAGTTTTATCGAAGCAGGAAGATTTTAAGCATTTCCGCGGTATTGCACA 146
BSNT_02312 150 GCAAGGCGGAGATGTTATTTTTCAATACTTAGAACAGCCAAGAAGCTGA 198
|||.||||||||||||.||||.||.||.|||||||||||||||||||||
RBAM_013580 147 GCAGGGCGGAGATGTTGTTTTCCAGTATTTAGAACAGCCAAGAAGCTGA 195
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