Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02328 and RBAM_013650

See Amino acid alignment / Visit BSNT_02328 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:01
# Commandline: needle
#    -asequence dna-align/BSNT_02328___glcT.1.9828.seq
#    -bsequence dna-align/RBAM_013650___glcT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02328___glcT-RBAM_013650___glcT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02328___glcT-RBAM_013650___glcT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02328___glcT
# 2: RBAM_013650___glcT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 868
# Identity:     714/868 (82.3%)
# Similarity:   714/868 (82.3%)
# Gaps:           2/868 ( 0.2%)
# Score: 2942.0
# 
#
#=======================================

BSNT_02328___      1 ATGACAAAGGAGCTGAGGATCGTGAATGGGTCCTTCACAGTGAAAAAGGT     50
                     |||||||||||||||||||||.||||.||||||||.|||||..|||||||
RBAM_013650__      1 ATGACAAAGGAGCTGAGGATCATGAAGGGGTCCTTTACAGTTGAAAAGGT     50

BSNT_02328___     51 ACTGAATAATAACGTATTAATTGCTTCTCATCATAAATACAGCGAAGTCG    100
                     |.|.|||||.||.||..|.||.||..|.|||.|||.||||||.||.||||
RBAM_013650__     51 ATTAAATAACAATGTGCTCATCGCAACACATGATAGATACAGTGAGGTCG    100

BSNT_02328___    101 TTTTAATCGGAAAAGGTATTGGTTTCGGAAAAAAACAAGATGATGTCATT    150
                     |.||||||||||||||.||.||.||.|||||||||||||..|||||||||
RBAM_013650__    101 TCTTAATCGGAAAAGGGATCGGCTTTGGAAAAAAACAAGCGGATGTCATT    150

BSNT_02328___    151 GAAGATAAAGGCTACGATAAAATGTTCATTTTAAAAGACGAGAAGGAACA    200
                     |||||||||||.||.||.||.||||||||.|||||.||.||.||.|||||
RBAM_013650__    151 GAAGATAAAGGGTATGACAAGATGTTCATCTTAAAGGATGAAAAAGAACA    200

BSNT_02328___    201 AAAGCAATTTAAAAAGCTCCTTGACTATGTTGATGAAAAGCTCGTTGATA    250
                     |||.|||||||||||||||||.|..|||||.||.||.|..||.||.||.|
RBAM_013650__    201 AAAACAATTTAAAAAGCTCCTCGGTTATGTGGACGAGACACTTGTCGACA    250

BSNT_02328___    251 TTTCAAACGATGTCATCTATCACAT-AAGAAATAGGACTAATCACTCATT    299
                     |.||.||.||.|||||.|||||.|| ||| ||..||||.|..||..|.||
RBAM_013650__    251 TCTCCAATGACGTCATTTATCATATCAAG-AAGCGGACAAGCCAACCGTT    299

BSNT_02328___    300 AAATGAACATATTCACATTGCGTTGACAGACCATATCGCATTTGCGATCA    349
                     ||||||.|||||.||.||||||.||||.|||||||||||.||||||.|.|
RBAM_013650__    300 AAATGAGCATATCCATATTGCGCTGACTGACCATATCGCCTTTGCGGTAA    349

BSNT_02328___    350 AAAGGCAGCAGCAGGGATTTGATATGAAAAATCCATTTCTAATGGAGACT    399
                     |..|||.|||||||||.|||||.||.|||||.||.|||||.|||||.||.
RBAM_013650__    350 AGCGGCTGCAGCAGGGTTTTGACATTAAAAACCCGTTTCTCATGGAAACC    399

BSNT_02328___    400 CAGTCACTATATCCTGAGGAGTACCAAATTGCCAAAGAAGTCATAGATAT    449
                     .|..|.||.|||||.||.||.|.||||||||||...||||||.|.|..||
RBAM_013650__    400 GAAACGCTTTATCCGGAAGAATTCCAAATTGCCCGTGAAGTCGTCGGCAT    449

BSNT_02328___    450 GATCAATGAAAAAGCGGGAATCTGCCTTCCGGAAGGGGAGATTGGTTTTA    499
                     |||.||||||||..||||||||||||||||||||||||||||.||.||||
RBAM_013650__    450 GATTAATGAAAAGACGGGAATCTGCCTTCCGGAAGGGGAGATCGGCTTTA    499

BSNT_02328___    500 TCGCTCTGCATATCCATTCAGCATTGACAAACCGTCCGCTGTCCGAGGTC    549
                     ||||||||||||||||.||.||..||||.||.||.||.||.||.||||||
RBAM_013650__    500 TCGCTCTGCATATCCACTCCGCCCTGACGAATCGGCCCCTTTCAGAGGTC    549

BSNT_02328___    550 AATCAGCACTCTCAGCTCATGGCGCAGCTTGTCGAGGTGATTGAAGACTC    599
                     ||||||||.||.|||||.|||.|.|.|||.||..||||||||||.||.||
RBAM_013650__    550 AATCAGCATTCACAGCTGATGTCCCGGCTCGTTCAGGTGATTGAGGAATC    599

BSNT_02328___    600 ATTTCAAATGAAAGTAAATAAGGAAAGTGTCAACTATTTGCGGCTGATCA    649
                     .||.||.||||||||.|||||.|||||.|||.|||||||||||||||||.
RBAM_013650__    600 TTTCCAGATGAAAGTGAATAAAGAAAGCGTCCACTATTTGCGGCTGATCC    649

BSNT_02328___    650 GGCATATCAGATTTACAATAGAAAGAATTAAAAAAGAAGAACCGACTAAA    699
                     ||||||||||||||||.|||||.||.|||||....|||||.|.|||.|||
RBAM_013650__    650 GGCATATCAGATTTACCATAGACAGGATTAATCGGGAAGAGCAGACAAAA    699

BSNT_02328___    700 GAACCAGAAAAATTAATGTTGTTATTGAAAAATGAATATCCGCTATGCTA    749
                     |||||||||||.||||||||.|||||||||||||||||.|||||||||||
RBAM_013650__    700 GAACCAGAAAAGTTAATGTTATTATTGAAAAATGAATACCCGCTATGCTA    749

BSNT_02328___    750 CAATACAGCTTGGAAATTGATTAAAATCTTGCAGCAAACATTGAAGAAAC    799
                     ||||||.|||||||||.||||.||||||||||||||||.|.||||.||||
RBAM_013650__    750 CAATACTGCTTGGAAACTGATAAAAATCTTGCAGCAAATACTGAAAAAAC    799

BSNT_02328___    800 CAGTTCATGAGGCGGAAGCGGTTTATCTGACGCTTCATCTGTACCGATTA    849
                     ||||||||||||||||||||||||||||.|||||||||.|||||||||||
RBAM_013650__    800 CAGTTCATGAGGCGGAAGCGGTTTATCTCACGCTTCATTTGTACCGATTA    849

BSNT_02328___    850 ACCAATAAAATTTCATAA    867
                     ||||||||||||||||||
RBAM_013650__    850 ACCAATAAAATTTCATAA    867


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02328 and RBAM_013650

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
