Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02330 and RBAM_013670

See Amino acid alignment / Visit BSNT_02330 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:02
# Commandline: needle
#    -asequence dna-align/BSNT_02330___ptsH.1.9828.seq
#    -bsequence dna-align/RBAM_013670___ptsH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02330___ptsH-RBAM_013670___ptsH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02330___ptsH-RBAM_013670___ptsH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02330___ptsH
# 2: RBAM_013670___ptsH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity:     246/267 (92.1%)
# Similarity:   246/267 (92.1%)
# Gaps:           0/267 ( 0.0%)
# Score: 1146.0
# 
#
#=======================================

BSNT_02330___      1 ATGGCACAAAAAACATTTAAAGTAACTGCAGATTCTGGAATCCATGCTCG     50
                     ||||||||||||||||||||||||||.||||||||.||||||||.|||||
RBAM_013670__      1 ATGGCACAAAAAACATTTAAAGTAACAGCAGATTCCGGAATCCACGCTCG     50

BSNT_02330___     51 TCCTGCGACAGTTCTTGTTCAAACTGCTAGCAAATACGACGCTGACGTTA    100
                     ||||||||||||||||||.||.|||||.|||||||||||.||||||||.|
RBAM_013670__     51 TCCTGCGACAGTTCTTGTACAGACTGCAAGCAAATACGATGCTGACGTAA    100

BSNT_02330___    101 ATTTAGAATATAACGGCAAAACAGTTAACCTTAAATCTATTATGGGTGTT    150
                     |.|||||||||||||||||||||||.||||||||.||.||.|||||.|||
RBAM_013670__    101 ACTTAGAATATAACGGCAAAACAGTAAACCTTAAGTCAATCATGGGCGTT    150

BSNT_02330___    151 ATGTCTTTAGGTATCGCTAAAGGCGCTGAGATCACAATCTCTGCTTCCGG    200
                     ||||||.|||||||.||||||||||||||.||||||||.||.|||||.||
RBAM_013670__    151 ATGTCTCTAGGTATTGCTAAAGGCGCTGAAATCACAATTTCCGCTTCAGG    200

BSNT_02330___    201 AGCTGACGAAAACGATGCTCTTAACGCTTTAGAAGAAACAATGAAAAGCG    250
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_013670__    201 CGCTGACGAAAACGATGCTCTTAACGCTTTAGAAGAAACAATGAAAAGCG    250

BSNT_02330___    251 AAGGACTCGGCGAGTAA    267
                     |||||||||||||||||
RBAM_013670__    251 AAGGACTCGGCGAGTAA    267


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