Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02333 and RBAM_013700

See Amino acid alignment / Visit BSNT_02333 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:02
# Commandline: needle
#    -asequence dna-align/BSNT_02333___splB.1.9828.seq
#    -bsequence dna-align/RBAM_013700___spIB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02333___splB-RBAM_013700___spIB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02333___splB-RBAM_013700___spIB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02333___splB
# 2: RBAM_013700___spIB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1033
# Identity:     825/1033 (79.9%)
# Similarity:   825/1033 (79.9%)
# Gaps:           8/1033 ( 0.8%)
# Score: 3245.0
# 
#
#=======================================

BSNT_02333___      1 ATGCAGAACCCATTTGTTCCGCAGCTTGTATATATAGAACCGAGGGCGCT     50
                     ||||.|||.||.|||||.||.||||||||.|||||.||||||||.|||||
RBAM_013700__      1 ATGCTGAAGCCGTTTGTGCCCCAGCTTGTTTATATTGAACCGAGAGCGCT     50

BSNT_02333___     51 GGAATATCCGCTAGGCCAAGAATTACAAGAA-AAATTTGAGAATATGGGC     99
                     .|||||.|||.||||.|||||..| .||||| ||.|||||.||.|||||.
RBAM_013700__     51 CGAATACCCGTTAGGACAAGAGCT-GAAGAATAAGTTTGAAAACATGGGG     99

BSNT_02333___    100 ATTGAAATCAGAGAAACAACATCCCACAATCAGGTGCGTAATATTCCTGG    149
                     .||||.|||||||||||.|||||.||.|||||.||.||.||||||||.||
RBAM_013700__    100 CTTGAGATCAGAGAAACGACATCACATAATCAAGTCCGGAATATTCCGGG    149

BSNT_02333___    150 GAAAAATCATCTT-CAGCAATATCGCAATGCGAAATCAACTTTAGTTATC    198
                     .|||||||| ||| ||||||||.||.||.|||||||||||.||.||.|||
RBAM_013700__    150 AAAAAATCA-CTTGCAGCAATACCGGAACGCGAAATCAACATTGGTAATC    198

BSNT_02333___    199 GGTGTCCGGAAAACATTAAAGTTTGATTCATCCAAACCCTCGGCTGAATA    248
                     ||.||||||||||||.|.||.||.|||||.||.||.||.||.||.|||||
RBAM_013700__    199 GGCGTCCGGAAAACACTGAAATTCGATTCTTCAAAGCCGTCCGCCGAATA    248

BSNT_02333___    249 TGCCATTCCGTTTGCAACAGGCTGCATGGGGCATTGTCATTACTGCTACC    298
                     |||||||||.|||||.||.|||||.|||||||||||.||.||.|||||||
RBAM_013700__    249 TGCCATTCCATTTGCGACGGGCTGTATGGGGCATTGCCACTATTGCTACC    298

BSNT_02333___    299 TGCAAACAACCATGGGATCAAAGCCGTATATCAGAACTTATGTAAACGTC    348
                     ||||.||.||.|||||.||||||||.||.|||.|.||.|||||.||.||.
RBAM_013700__    299 TGCAGACGACGATGGGGTCAAAGCCTTACATCCGGACATATGTCAATGTG    348

BSNT_02333___    349 GAAGAGATTTTGGATCAGGCAGATAAGTATATGAAGGAGCGCGCACCAGA    398
                     |||||||||.||||||||||.|||.||||||||||.||.||.||.||.||
RBAM_013700__    349 GAAGAGATTCTGGATCAGGCTGATGAGTATATGAAAGAACGGGCGCCGGA    398

BSNT_02333___    399 GTTCACAAGGTTCGAAGCATCATGTACGTCAGACATTGTAGGAATTGATC    448
                     .||.|||||.||.|||||.||.|||||.||.||.||.||.||||||||||
RBAM_013700__    399 ATTTACAAGATTTGAAGCCTCTTGTACATCTGATATCGTCGGAATTGATC    448

BSNT_02333___    449 ATCTGACACACACGCTGAAGCGCGCCATTGAACATTTTGGTCAAAGTGAT    498
                     ||||||||||.||..|.||..|.||||||||||||||.||.|||||.||.
RBAM_013700__    449 ATCTGACACATACATTAAAAAGAGCCATTGAACATTTCGGACAAAGCGAA    498

BSNT_02333___    499 CTCGGAAAGCTCCGATTTGTAACGAAATTTCATCATGTCGATCACCTATT    548
                     .|.|||.|||||.||||.||.||.||||||||.||.||||||||..|..|
RBAM_013700__    499 TTGGGACAGCTCAGATTCGTGACTAAATTTCACCACGTCGATCATTTGCT    548

BSNT_02333___    549 AGACGCAAAGCATAACGGGAAAACGAGATTCAGATTCAGTATTAATGCCG    598
                     .||.|||||.||||||||.||.||.||.|||||||||||.||.|||||.|
RBAM_013700__    549 TGATGCAAAACATAACGGAAAGACTAGGTTCAGATTCAGCATCAATGCGG    598

BSNT_02333___    599 ACTATGTGATTAAAAACTTTGAGCCGGGAACTTCACCTCTTGATAAGCGG    648
                     |.|||||.||||||||||||||.|||||||||||.||.||.||.||.|||
RBAM_013700__    599 ATTATGTCATTAAAAACTTTGAACCGGGAACTTCTCCGCTCGACAAACGG    648

BSNT_02333___    649 ATAGAGGCGGCAGTAAAAGTTGCAAAAGCAGGCTACCCGCTAGGCTTTAT    698
                     |||||.||.||.||.|||||.||.|||||.|||||.|||||.||.||.||
RBAM_013700__    649 ATAGAAGCCGCCGTGAAAGTCGCTAAAGCGGGCTATCCGCTCGGTTTCAT    698

BSNT_02333___    699 TGTTGCTCCGATTTATATTCATGAAGGCTGGGAAGAAGGATACAGACATC    748
                     .||.||.||||||||||||||.||.||||||||.|||||.||.|...|.|
RBAM_013700__    699 CGTGGCGCCGATTTATATTCACGATGGCTGGGAGGAAGGCTATAAGGAAC    748

BSNT_02333___    749 TGTTTGAAAAGCTTGATGCTGC-TTTGCCGCAGGACGTTAGACATGACAT    797
                     |||||||.||.||.|||||.|| .|||..| |.||||||.|.||||||||
RBAM_013700__    749 TGTTTGAGAAACTGGATGCGGCGCTTGATG-AAGACGTTCGGCATGACAT    797

BSNT_02333___    798 AACGTTTGAATTAATTCAACACCGTTTTACAAAACCGGCCAAACGAGTGA    847
                     .||.||||||.|.||.||.||||||||||||||||||||||||||.||||
RBAM_013700__    798 TACATTTGAACTGATCCAGCACCGTTTTACAAAACCGGCCAAACGGGTGA    847

BSNT_02333___    848 TAGAGAAAAATTATCCGAAGACGAAGCTCGAATTAGATGAAGAAAAGCGC    897
                     |.|||||.||.||||||||.||.|||||.||..|.|||||||||||||||
RBAM_013700__    848 TTGAGAAGAACTATCCGAAAACAAAGCTTGAGCTTGATGAAGAAAAGCGC    897

BSNT_02333___    898 CGTTATAAATGGGGACGCTACGGGATCGGAAAATATATATATCAGAAAGA    947
                     .|.||.|||||||||||||||||.|||||.||.||||||||.||.||.||
RBAM_013700__    898 AGATACAAATGGGGACGCTACGGAATCGGCAAGTATATATACCAAAAGGA    947

BSNT_02333___    948 TGAAGAGCATGCACTT-CGAGAAGCACTTGAATCCTATATTGATACCTTT    996
                     .|||||.|||| |||| .|.|||.||||.|||||.|||||.||.||||.|
RBAM_013700__    948 CGAAGAACATG-ACTTAAGGGAAACACTCGAATCTTATATCGAAACCTAT    996

BSNT_02333___    997 TTCCCTAACGCGAAAATTGAATATTTCACTTAA   1029
                     ||.||.||.||||||||.||||||||.||.|||
RBAM_013700__    997 TTTCCGAAAGCGAAAATCGAATATTTTACGTAA   1029


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