Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02347 and RBAM_013800
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:04
# Commandline: needle
# -asequence dna-align/BSNT_02347___cheV.1.9828.seq
# -bsequence dna-align/RBAM_013800___cheV.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02347___cheV-RBAM_013800___cheV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02347___cheV-RBAM_013800___cheV.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02347___cheV
# 2: RBAM_013800___cheV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 919
# Identity: 686/919 (74.6%)
# Similarity: 686/919 (74.6%)
# Gaps: 41/919 ( 4.5%)
# Score: 2598.0
#
#
#=======================================
BSNT_02347___ 1 ---------------------------TTGGATTCTGGTACAAATGAATT 23
||||||||.||.|||||.|||||
RBAM_013800__ 1 TTGTCTTTACAACAATACGATATTTTATTGGATTCAGGCACAAACGAATT 50
BSNT_02347___ 24 AGAAATTGTGAAGTTTGGCGTGGGTGAAAATGCTTTCGGAATTAACGTCA 73
||||||.||.||.||||..||.||||..|||.|.||.||.||.||.||.|
RBAM_013800__ 51 AGAAATCGTCAAATTTGAAGTAGGTGTCAATACATTTGGCATAAATGTGA 100
BSNT_02347___ 74 TGAAGGTAAGAGAAATTATTCAGCCTGTCGAGGTGACATCAGTGCCTCAC 123
||||.||..|.|||||.||||||||.||.||.||.|||||.||||||||.
RBAM_013800__ 101 TGAAAGTCCGGGAAATCATTCAGCCGGTAGATGTCACATCTGTGCCTCAG 150
BSNT_02347___ 124 TCCCATCAGCATGTAGAAGGAATGATTAAACTCAGAGGAGAAATCCTCCC 173
||.|||.|..|.||||||||.||||||||.||.|||||.|||||.||.||
RBAM_013800__ 151 TCTCATAAAGACGTAGAAGGGATGATTAAGCTGAGAGGCGAAATTCTTCC 200
BSNT_02347___ 174 TGTGATCAGTCTCTTCTCATTTTTTGGAGTAGA-GCCTGAAGGATCAAAA 222
.||.||||||||.|...|.|||||.||.||.|| ||| ||||.|.|||||
RBAM_013800__ 201 CGTCATCAGTCTGTATACCTTTTTCGGCGTTGATGCC-GAAGAAGCAAAA 249
BSNT_02347___ 223 GATGAGAAATATATCGTGACTGAATTTAATAAACGGAAAATTGTTTTTCA 272
||.||.|||||||||||.||.|||||.||.||.||||||||.||.|||||
RBAM_013800__ 250 GACGATAAATATATCGTAACGGAATTCAACAAGCGGAAAATCGTCTTTCA 299
BSNT_02347___ 273 TGTCGGCTCTGTTTCTCAAATTCACAGAGTATCCTGGGAAGCGATTGAAA 322
.|||||.||.|||||.|||||.|||||.||.||||||||.||||||||||
RBAM_013800__ 300 CGTCGGTTCCGTTTCACAAATCCACAGGGTGTCCTGGGAGGCGATTGAAA 349
BSNT_02347___ 323 AGCCGACATCGTTAAATCAAGGAATGGAGCGGCACCTTACCGGG-ATTAT 371
|||||||.||..|.||.||.||.||||||||||| .|||.|||| ||.||
RBAM_013800__ 350 AGCCGACTTCCCTGAACCAGGGGATGGAGCGGCA-TTTAACGGGAATCAT 398
BSNT_02347___ 372 TAAGCTCGAAGACCTGATGATCTTTTTGCCTGACTATGAAAAAATTATTT 421
.||.||.||||||..||||||||||.|||||||.||||||||.||.||||
RBAM_013800__ 399 CAAACTGGAAGACACGATGATCTTTCTGCCTGATTATGAAAAGATCATTT 448
BSNT_02347___ 422 ATGACATTGAATCAGATTCAGGTGTTGACACGTATAATATGCATACCGAG 471
||||.||||||||.|..||.||.|||||.||.|||.||.|.|||...||.
RBAM_013800__ 449 ATGATATTGAATCGGCATCCGGAGTTGAGACTTATCATGTCCATCAGGAA 498
BSNT_02347___ 472 GGCTTCGATGAAAGAAGAACTGATAAAAAGCTTATCATTGTAGAGGACTC 521
||.||.|||||||||.|..|.|.||||||.||.|||||.||.||.||.||
RBAM_013800__ 499 GGATTTGATGAAAGACGGGCGGGTAAAAAACTGATCATCGTTGAAGATTC 548
BSNT_02347___ 522 ACCGCTTTTGATGCGCCTCTTGCAGGATGAATTAAAAGAAGCAGGGTACA 571
.||||||.|||||||.||.|||..||||||..|.|..||.||.|||||||
RBAM_013800__ 549 GCCGCTTCTGATGCGTCTTTTGACGGATGAGCTGACTGAGGCGGGGTACA 598
BSNT_02347___ 572 ACAACATCGCTTCGTTTGAAAATGGAAAAGAGGCATATGAATACATTATG 621
...|.||||.|.||||||||||.||||||||.||.|||||.|||.|..||
RBAM_013800__ 599 GTGAAATCGTTACGTTTGAAAACGGAAAAGAAGCGTATGATTACGTCGTG 648
BSNT_02347___ 622 AACCTTGCTGAAAACG-----AAACTGATTTATCAGAACAGATTGATATG 666
.|.||..|.||.|||| ||.||| |||||.||.|||||.|||
RBAM_013800__ 649 GAACTGACGGATAACGGAGCAAACCTG-----TCAGACCATATTGACATG 693
BSNT_02347___ 667 ATCATCACTGATATTGAAATGCCAAAAATGGACGGACACAGGCTCACAAA 716
||.||||.|||.|||||||||||.|||||||||||.||..|..|.||.||
RBAM_013800__ 694 ATTATCAGTGACATTGAAATGCCGAAAATGGACGGGCATCGTTTGACGAA 743
BSNT_02347___ 717 GCTGCTGAAGGAAAATCCGAAAAGCTCAGATGTGCCGGTTATGATTTTCT 766
|||.||.|||||.||.|||.|||||||.|||||||||.||||||||||||
RBAM_013800__ 744 GCTCCTTAAGGATAACCCGCAAAGCTCTGATGTGCCGATTATGATTTTCT 793
BSNT_02347___ 767 CATCGTTAATTACGGATGATCTGCGTCACCGCGGCGAAGTTGTAGGCGCA 816
|.||..|.||||||||.||.|||||.|||||.||||||||.||.||.||.
RBAM_013800__ 794 CGTCCCTGATTACGGACGACCTGCGCCACCGGGGCGAAGTAGTCGGAGCG 843
BSNT_02347___ 817 GATGAGCAAATCAGCAAGCCTGAGATCAGTGATTTGATTAAAAAAGTGGA 866
|||||.||.||||||||||||||.|||||.||..|.||||||||||||||
RBAM_013800__ 844 GATGAACAGATCAGCAAGCCTGAAATCAGCGAGCTCATTAAAAAAGTGGA 893
BSNT_02347___ 867 TACGTATGTTATTGAATAA 885
||||||.||.||||||||.
RBAM_013800__ 894 TACGTACGTGATTGAATAG 912
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