Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02357 and RBAM_013870

See Amino acid alignment / Visit BSNT_02357 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:04
# Commandline: needle
#    -asequence dna-align/BSNT_02357___ykuJ.1.9828.seq
#    -bsequence dna-align/RBAM_013870___ykuJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02357___ykuJ-RBAM_013870___ykuJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02357___ykuJ-RBAM_013870___ykuJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02357___ykuJ
# 2: RBAM_013870___ykuJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity:     222/240 (92.5%)
# Similarity:   222/240 (92.5%)
# Gaps:           0/240 ( 0.0%)
# Score: 1038.0
# 
#
#=======================================

BSNT_02357___      1 ATGTCACAATTAATGGGTATCATCACACGGCTGCAAAGTCTGCAAGAAAC     50
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
RBAM_013870__      1 ATGTCACAATTAATGGGTATCATCACGCGGCTGCAAAGTCTGCAAGAAAC     50

BSNT_02357___     51 AGCGGAAGCGGCTAACGAGCCAATGCAGCGCTATTTCGAAGTGAATGGTG    100
                     |||||||||||||||||||||.||||||||.|||||.|||||.||.||.|
RBAM_013870__     51 AGCGGAAGCGGCTAACGAGCCGATGCAGCGTTATTTTGAAGTTAACGGCG    100

BSNT_02357___    101 AGAAAATATGCAGTGTTAAATATTTCGAAAAAAATCAAACGTTTGAACTG    150
                     |.|||||.||||||||||||||||||||||||||||||||||||||||||
RBAM_013870__    101 AAAAAATTTGCAGTGTTAAATATTTCGAAAAAAATCAAACGTTTGAACTG    150

BSNT_02357___    151 ACGGTTTTCCAAAAGGGTGAAAAACCTAACACATATCCGTTTGATAATAT    200
                     ||||||||||||||.||||||||||||||||||||||||||||||||.||
RBAM_013870__    151 ACGGTTTTCCAAAAAGGTGAAAAACCTAACACATATCCGTTTGATAACAT    200

BSNT_02357___    201 CGACATGGTTTCCATCGAAATCTTTGAACTTCTTCAGTAA    240
                     .||||||.||||.||.|||||.|||||.||.|||||||||
RBAM_013870__    201 TGACATGATTTCTATTGAAATTTTTGAGCTCCTTCAGTAA    240


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