Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02387 and RBAM_014050
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:06
# Commandline: needle
# -asequence dna-align/BSNT_02387___mobB.1.9828.seq
# -bsequence dna-align/RBAM_014050___mobB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02387___mobB-RBAM_014050___mobB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02387___mobB-RBAM_014050___mobB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02387___mobB
# 2: RBAM_014050___mobB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 545
# Identity: 370/545 (67.9%)
# Similarity: 370/545 (67.9%)
# Gaps: 52/545 ( 9.5%)
# Score: 1154.5
#
#
#=======================================
BSNT_02387___ 1 ATGGCCTTGGTCCGTCCTTTCCCGATCGTCCAAGTTGTAGGATTTCAAAA 50
.|||||..|.||||||||||||||||..|.|||||.||||||||
RBAM_014050__ 1 ------GTGGTCAATTCTTTCCCGATCGTCCAGATCGTAGGTTTTCAAAA 44
BSNT_02387___ 51 CAGCGGGAAAACAACGTTTATTGAGCGCATTCTTGAAAAAGCCTCTGAAC 100
||||||.|||||||||||||||||.||..|.| |||||..|.|.|.|||
RBAM_014050__ 45 CAGCGGTAAAACAACGTTTATTGAACGTGTGC-TGAAAGCGGCGCCGAA- 92
BSNT_02387___ 101 AGGGAGT-CCATTTGGGCTGCCTGAAGCATCATGGTCACGGCGGTGAACC 149
.|||| |.||.|.||.||..|.||.|||||.||.||.|||||.||.||
RBAM_014050__ 93 --AGAGTGCGATATTGGATGTTTAAAACATCACGGACATGGCGGAGAGCC 140
BSNT_02387___ 150 GCAAACGCTCACGGAAGGAAAAGACACGGACCGTT----ACAAGGCGGCA 195
|.||.|..|..|.||.|||||||||.||||.|||| |.|| ||.
RBAM_014050__ 141 GGAACCTTTTTCTGACGGAAAAGACTCGGAGCGTTTTTCAAAA----GCC 186
BSNT_02387___ 196 GGTGCTGATGTAACAGCAGTAGAAGGTGCTGGTGTGTTACAGCTGACTGC 245
||.||.|..||.||.|||||||||||.|..||.||..|.|||||.||.||
RBAM_014050__ 187 GGGGCCGCGGTTACGGCAGTAGAAGGGGACGGCGTCCTGCAGCTTACGGC 236
BSNT_02387___ 246 CCGCCGCAATTGGGATTTGGCACGGCTGATTGAGT-TATACCAATTTCTC 294
.||....||.||||||.||||..|..||| |.||| |.||..|||.|||.
RBAM_014050__ 237 GCGAAAAAAATGGGATCTGGCGGGTTTGA-TCAGTCTGTATGAATGTCTG 285
BSNT_02387___ 295 GAAACAGACTGTCTTCTGATTGAAGGCTTTAAAAAAGCCTCTTATCCTAA 344
|.||..|||.|||||||.||.||.||.||||||.|.||..|..||||.||
RBAM_014050__ 286 GGAATTGACGGTCTTCTCATAGAGGGATTTAAACATGCGCCGCATCCGAA 335
BSNT_02387___ 345 AGTGGTTATCCTAAGTGA--AAAG-----GAAGATCTGG-AAGCGCTGCA 386
|.|..||| ||| |||| |||||| ||| ||..|||| |
RBAM_014050__ 336 AATCATTA-------TGATCAAAGACAGCGAAGAT-TGGCAAAAGCTG-A 376
BSNT_02387___ 387 AGCAGTAAAT-------ATAATCGCCATCATCTATAGAAAAAAAGAGCAT 429
||||.| | .|.|||||..|..||...|||||.|..||||||
RBAM_014050__ 377 AGCATT---TGGAGCGCGTGATCGCGGTTGTCAGCAGAAATACGGAGCAT 423
BSNT_02387___ 430 ATGACAG-AGCAT-CAGGGATTACCCGTTTTTCATGCGGATGATCCGGTT 477
|||.|.| || || ||||.| |.|||||.||.||||||||.|||||||.|
RBAM_014050__ 424 ATGCCGGCAG-ATGCAGGCA-TGCCCGTATTCCATGCGGACGATCCGGCT 471
BSNT_02387___ 478 GCCGTGGACTTTGTGCTTTCACAGCTGAAGGGGGAATCTGCATAA 522
|||.||...|||||||||||.||||||||.|||||||||||||||
RBAM_014050__ 472 GCCATGATGTTTGTGCTTTCGCAGCTGAAAGGGGAATCTGCATAA 516
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