Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02414 and RBAM_014230

See Amino acid alignment / Visit BSNT_02414 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:08
# Commandline: needle
#    -asequence dna-align/BSNT_02414___kinC.1.9828.seq
#    -bsequence dna-align/RBAM_014230___kinC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02414___kinC-RBAM_014230___kinC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02414___kinC-RBAM_014230___kinC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02414___kinC
# 2: RBAM_014230___kinC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1344
# Identity:     952/1344 (70.8%)
# Similarity:   952/1344 (70.8%)
# Gaps:          99/1344 ( 7.4%)
# Score: 3301.0
# 
#
#=======================================

BSNT_02414___      1 ATGAGAAAATATCAAGCTCGTATCATTTCCATCATTTTGGCAATGATTTT     50
                     |||.|||||||||||||.||||||||||||.|.||.||||||||||||||
RBAM_014230__      1 ATGGGAAAATATCAAGCGCGTATCATTTCCTTAATCTTGGCAATGATTTT     50

BSNT_02414___     51 TATAATGTTTTGGGATTATTTATTTTATTTTATAGGCAAA---AACCCGA     97
                     |||.||||||||||||||||||||||||.|.||.|   ||   ||.||||
RBAM_014230__     51 TATTATGTTTTGGGATTATTTATTTTATATGATTG---AACGGAATCCGA     97

BSNT_02414___     98 TTAATTGGCCTGTTGATATTGTGTATACTGCAGTCACGCTGGTAAGTGTC    147
                     ||||.|||||.|||||.||....|.|||.||.|||||..|..|.||.|||
RBAM_014230__     98 TTAACTGGCCCGTTGACATCACCTTTACCGCCGTCACATTAATCAGCGTC    147

BSNT_02414___    148 TGGATGCTGGCTTATTATATTGATGAGAAACAGCAGCTGGTTAAGAAAAT    197
                     |||.||||||||||||||.|.|||.|.|||.||||||||.|...|.|..|
RBAM_014230__    148 TGGCTGCTGGCTTATTATGTGGATAATAAAAAGCAGCTGCTGGCGGAGCT    197

BSNT_02414___    198 GAAGGATAACGAATGGAAGTATAAA-CA-----GCTTTCTGAAGAAAAAA    241
                     ||||||.|.||      ||.|.||| ||     ||||||.||.||.||||
RBAM_014230__    198 GAAGGACAGCG------AGCAGAAAGCAAAGGCGCTTTCAGATGAGAAAA    241

BSNT_02414___    242 ACCGCATCATGGATAATTTGCAGGAAATCGTATTTCAAACGAATGCAAAA    291
                     ||||.||||||||.|||.|||||||||||||.|||||.|||.|||||.||
RBAM_014230__    242 ACCGGATCATGGACAATCTGCAGGAAATCGTTTTTCAGACGGATGCACAA    291

BSNT_02414___    292 GGCGAA-ATTACATATTTAAACCAAGCGTGGGCATCAATAACCGGCTTTT    340
                     || ||| |||||||||||.||.||.||.|||.|..|.||.||.|||...|
RBAM_014230__    292 GG-GAATATTACATATTTGAATCAGGCCTGGACGGCGATTACGGGCCACT    340

BSNT_02414___    341 CAATCAGTGAATGTATGGGAACAATGTATAACGATTACTTCATAAAAGAA    390
                     |.|||||.|||||||||||.||.||||||||.|||||.||.|||||||||
RBAM_014230__    341 CCATCAGCGAATGTATGGGCACGATGTATAATGATTATTTTATAAAAGAA    390

BSNT_02414___    391 AAGCACGTAGC--CGACCACATTAACACCCAAATCCAAAACAAAGC----    434
                     ||  ||.||.|  .||..|.||||.|.||||||||       ||||    
RBAM_014230__    391 AA--ACATATCATTGATTATATTATCTCCCAAATC-------AAGCAGCA    431

BSNT_02414___    435 GT---CTTCTGGCATGTTTACGGCAAAATACGTGACAAAAAACGGCACGA    481
                     ||   |.||.||.|||||||||||.|||||..|.|.||.|.|||||.|||
RBAM_014230__    432 GTCCCCGTCAGGAATGTTTACGGCCAAATATATTAAAAGAGACGGCTCGA    481

BSNT_02414___    482 TTTTTTGGGGAGAAGTTCATTATAAACTTTACTATGACCGGGATGAC--C    529
                     |.||||||||||||||.||||||||.||.||.|||||||  |..|||  .
RBAM_014230__    482 TCTTTTGGGGAGAAGTCCATTATAAGCTGTATTATGACC--GCAGACAGA    529

BSNT_02414___    530 AATTTACAGGCAGCCTGGGTACAATGTCAGATATCACTGAGCGGAAAGAG    579
                     |||||...||.||||||||.||.|||||.|||||||.|||.||||||.|.
RBAM_014230__    530 AATTTGTCGGAAGCCTGGGGACGATGTCTGATATCAGTGAACGGAAAAAA    579

BSNT_02414___    580 GCTGAAGATGAGCTCATTGAGATTAATGAACGGCTGGCGAGGGAATCCCA    629
                     ||.|..||.|||||..|.||.|..||.|||||.||.||.|.|.||||.||
RBAM_014230__    580 GCGGTCGACGAGCTTCTGGAAACGAACGAACGCCTTGCCATGCAATCTCA    629

BSNT_02414___    630 GAAACTATCAATCACAAGTGAACTTGCCGCAGGTATTGCTCATGAGGTCA    679
                     .||.||..|.||..|..|.||.|||||.|||||.||.||.|||||.||.|
RBAM_014230__    630 AAAGCTGGCCATTGCCGGGGAGCTTGCGGCAGGAATCGCCCATGAAGTAA    679

BSNT_02414___    680 GAAACCCTTTAACATCTGTCAGTGGTTTCCTCCAGATTATGAAAACACAA    729
                     ||||.||||||||.||.|||||.||.||.||||||.|.||||||.|.||.
RBAM_014230__    680 GAAATCCTTTAACGTCAGTCAGCGGCTTTCTCCAGCTGATGAAAGCCCAG    729

BSNT_02414___    730 TATCCGGACAGAAAAGACTATTTTGACATCATCTTTTCAGAGATTAAAAG    779
                     ||||||||.||||..||.||||||||.|||||.|||||.|||||||||||
RBAM_014230__    730 TATCCGGAAAGAACGGATTATTTTGATATCATTTTTTCGGAGATTAAAAG    779

BSNT_02414___    780 AATCGATTTAGTGCTCAGCGAGCTG---CTGCTTGCAAAACCGCAGGCAA    826
                     .||.|||.|.|||||..|.||||||   |||||.||.||.||||||.|..
RBAM_014230__    780 GATTGATCTCGTGCTGGGGGAGCTGCTTCTGCTCGCCAAGCCGCAGACCG    829

BSNT_02414___    827 TCACATTTAAAACACACCAGCTTAATGAGATCTTGAAACAAGTCACGACA    876
                     |.||.||||...|.||.||.||.||..|.||.||....||.||..||||.
RBAM_014230__    830 TGACGTTTACCGCTCATCATCTCAACCATATTTTACGGCAGGTGGCGACG    879

BSNT_02414___    877 TTGCTTGATACCAATGCAATTCTGTCCAATATCGTCATAGAGAAAAATTT    926
                     .|.|||||.||.||.||..|.|||||.||.|..||.||.|||||..||||
RBAM_014230__    880 CTTCTTGACACGAACGCGGTGCTGTCGAACACTGTAATTGAGAAGGATTT    929

BSNT_02414___    927 CAAAGAGACAGATGGCTGTATGATTAATGGAGACGAAAATCAGCTGAAGC    976
                     ||...||||.||...|||||||.|.||.||.||||||||.||||||||.|
RBAM_014230__    930 CAGGCAGACTGAGTCCTGTATGGTCAACGGTGACGAAAACCAGCTGAAAC    979

BSNT_02414___    977 AGGTCTTTATCAACATCATTAAAAACGGAATTGAGGCAATGCCAAAGGGT   1026
                     ||||.||||||||.||.||||||||.|..|||||.||.|||||..|.||.
RBAM_014230__    980 AGGTATTTATCAATATTATTAAAAATGCGATTGAAGCGATGCCTGACGGC   1029

BSNT_02414___   1027 GGTG-----TCGTAACCATTTCAACTGCTAAAACCGCCTCTCAT------   1065
                     || |     ||.|    ||||..||    |||||.|     .||      
RBAM_014230__   1030 GG-GAATATTCAT----ATTTATAC----AAAACGG-----GATGAAGAA   1065

BSNT_02414___   1066 ---GCAGTGATAAGCGTAAAGGATGAAGGAAACGGCATGCCGCAGGAAAA   1112
                        ||.|||||.|||.||.||||||||||||||||||||.||.|.|||||
RBAM_014230__   1066 TACGCGGTGATCAGCATACAGGATGAAGGAAACGGCATGTCGAAAGAAAA   1115

BSNT_02414___   1113 GC-TGAAGCAGATTGGCAAACCTTTTTATTCAACAAAAGAAAAGGGCACT   1161
                     || |||| .|.||.||.|||||.||||..|||||||||||..||||.||.
RBAM_014230__   1116 GCTTGAA-AACATCGGGAAACCGTTTTTCTCAACAAAAGATCAGGGAACG   1164

BSNT_02414___   1162 GGACTGGGACTTCCCATTTGTTTGAGAATCCTGAAGGAACATGACGGGGA   1211
                     ||.||.||.|||||.||||||||..||||.||||||||.|||.|.||..|
RBAM_014230__   1165 GGTCTCGGGCTTCCGATTTGTTTACGAATTCTGAAGGAGCATAATGGTAA   1214

BSNT_02414___   1212 ATTGAAAATCGAAAGTGAAGCTGGAAAAGGCAG--CGTCTTTCAAGTGGT   1259
                     |.|.||.||..|.||..||..||||.|||||||  ||  |||||.|||.|
RBAM_014230__   1215 ACTTAACATTAAGAGCAAAAATGGAGAAGGCAGTACG--TTTCAGGTGAT   1262

BSNT_02414___   1260 TTTGCCTTTAAAATCAGACAGCTGA-------------------   1284
                     |.||||.|||.||.| |.|.||||.                   
RBAM_014230__   1263 TCTGCCGTTAGAAGC-GGCTGCTGTCCAAAAGGAGGAAAAATAA   1305


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