Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_02420 and RBAM_014280

See Amino acid alignment / Visit BSNT_02420 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:09
# Commandline: needle
#    -asequence dna-align/BSNT_02420___ykzG.1.9828.seq
#    -bsequence dna-align/RBAM_014280___ykzG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02420___ykzG-RBAM_014280___ykzG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02420___ykzG-RBAM_014280___ykzG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02420___ykzG
# 2: RBAM_014280___ykzG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 211
# Identity:     186/211 (88.2%)
# Similarity:   186/211 (88.2%)
# Gaps:           2/211 ( 0.9%)
# Score: 818.0
# 
#
#=======================================

BSNT_02420___      1 ATGATTTATAAGGTATTTTATCAAGAGAAGGCTGACGAAGTACCTGTTCG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_014280__      1 ATGATTTATAAGGTATTTTATCAAGAGAAGGCTGACGAAGTACCTGTTCG     50

BSNT_02420___     51 GGAAAAGACAGATTCACTTTATATTGAAGGCGTATCTGAGCGTGACGTCA    100
                     ||||||.||||||||||||||.|||||.|||||.||.||.||.|||||||
RBAM_014280__     51 GGAAAAAACAGATTCACTTTACATTGAGGGCGTTTCAGAACGGGACGTCA    100

BSNT_02420___    101 GAACAAAGCTGAAAGAAAAGAAATTTAATATTGAGTTTATTACA-CCTGT    149
                     ||||.||.||||||||..||||||..||.|||||.|||.|| || |||||
RBAM_014280__    101 GAACGAAACTGAAAGATCAGAAATACAACATTGAATTTGTT-CAGCCTGT    149

BSNT_02420___    150 TGATGGTGCATTCTTAGAATATGAACAACAGAGCGAAAATTTTAAAGTAT    199
                     .||.|||||.||.|||||||||||..|.||||||||||||||||||||||
RBAM_014280__    150 GGACGGTGCTTTTTTAGAATATGAGAAGCAGAGCGAAAATTTTAAAGTAT    199

BSNT_02420___    200 TGGAGTTATGA    210
                     |||||||||||
RBAM_014280__    200 TGGAGTTATGA    210


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.