Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02432 and RBAM_014440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:10
# Commandline: needle
# -asequence dna-align/BSNT_02432___pdhC.1.9828.seq
# -bsequence dna-align/RBAM_014440___pdhC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02432___pdhC-RBAM_014440___pdhC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02432___pdhC-RBAM_014440___pdhC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02432___pdhC
# 2: RBAM_014440___pdhC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1332
# Identity: 1175/1332 (88.2%)
# Similarity: 1175/1332 (88.2%)
# Gaps: 6/1332 ( 0.5%)
# Score: 5249.0
#
#
#=======================================
BSNT_02432___ 1 GTGGCATTTGAATTTAAACTTCCAGATATCGGGGAAGGTATCCACGAAGG 50
|||||||||||||||||||||||.||||||||||||||||||||||||||
RBAM_014440__ 1 GTGGCATTTGAATTTAAACTTCCGGATATCGGGGAAGGTATCCACGAAGG 50
BSNT_02432___ 51 CGAAATCGTAAAATGGTTTGTCAAGCCTAACGACGAGGTAGACGAAGATG 100
|||||||||||||||||||||.|||||.||||||||||||||.|||||.|
RBAM_014440__ 51 CGAAATCGTAAAATGGTTTGTTAAGCCGAACGACGAGGTAGAAGAAGACG 100
BSNT_02432___ 101 ATGTACTGGCTGAAGTCCAAAATGATAAAGCAGTAGTAGAAATTCCTTCA 150
||||.|||||||||||.|||||||||||||||||.|||||||||||||||
RBAM_014440__ 101 ATGTTCTGGCTGAAGTGCAAAATGATAAAGCAGTGGTAGAAATTCCTTCA 150
BSNT_02432___ 151 CCTGTTAAAGGAAAAGTATTAGAATTAAAAGTTGAAGAGGGAACGGTTGC 200
||||||||||||||||||||||||||||||||||||||||||||.|||||
RBAM_014440__ 151 CCTGTTAAAGGAAAAGTATTAGAATTAAAAGTTGAAGAGGGAACAGTTGC 200
BSNT_02432___ 201 AACTGTTGGACAAACGATTATTACGTTTGATGCACCTGGTTACGAAGATC 250
||||||||||||||||||||||||||||||.|||||||||||||||||||
RBAM_014440__ 201 AACTGTTGGACAAACGATTATTACGTTTGACGCACCTGGTTACGAAGATC 250
BSNT_02432___ 251 TTCAATTTAAAGGCAGCGACGAGTCTGACGATGCGAAAACTGAAGCACAA 300
|||||||||||||.|||.|.||.||.|..|||||||||||||||||.|||
RBAM_014440__ 251 TTCAATTTAAAGGAAGCCATGATTCAGGAGATGCGAAAACTGAAGCTCAA 300
BSNT_02432___ 301 GTTCAGTCAACTGCAGAAGCTGGAAAAGACGTTGCGAAAGAAGAGCAAGC 350
||||||||..||||.|||||.||..|.||..|..|.|||||||||....|
RBAM_014440__ 301 GTTCAGTCGTCTGCTGAAGCAGGGCAGGATATCTCTAAAGAAGAGACTCC 350
BSNT_02432___ 351 TCAAGAGCCTGCAAAAGCTACTGGCGCAGGACAGCAGGATCAAGCTGAAG 400
|.|||||||||||||||..||.|||||||||||||||||.||||..||||
RBAM_014440__ 351 TAAAGAGCCTGCAAAAGAAACCGGCGCAGGACAGCAGGACCAAGTGGAAG 400
BSNT_02432___ 401 TTGACCCGAACAAACGCGTGATCGCTATGCCTTCCGTACGTAAATATGCT 450
.|||.||||||||||||||||||||.||||||||||||||.||||||||.
RBAM_014440__ 401 CTGATCCGAACAAACGCGTGATCGCCATGCCTTCCGTACGCAAATATGCC 450
BSNT_02432___ 451 CGTGAAAAAGGCGTAGACATCCGTAAGGTTACTGGTTCAGGCAACAACGG 500
||||||||||||||.||.||||||||.||.||.|||||||||||.|||||
RBAM_014440__ 451 CGTGAAAAAGGCGTGGATATCCGTAAAGTAACAGGTTCAGGCAATAACGG 500
BSNT_02432___ 501 ACGTGTTGTAAAAGAAGATATCGACAGCTTTGTAAACGGAGGAGCG---C 547
||||||||||||||||||||||||||||||||.|||.||||||||| |
RBAM_014440__ 501 ACGTGTTGTAAAAGAAGATATCGACAGCTTTGCAAATGGAGGAGCGGCTC 550
BSNT_02432___ 548 AAGAAGCTGCACCGCAAGAAACAGCTGCACCACAAGAAACAGCTGCTAAA 597
|||||||.|||||||||||||||||||||||.||.|||||| ||||||
RBAM_014440__ 551 AAGAAGCGGCACCGCAAGAAACAGCTGCACCTCAGGAAACA---GCTAAA 597
BSNT_02432___ 598 CCGGCTGCTGCACCAGCTCCAGAGGGCGAATTCCCAGAAACACGCGAAAA 647
||.||.||.||.|..|||||.||.|||||||||||.||||||||||||||
RBAM_014440__ 598 CCTGCAGCGGCTCAGGCTCCTGAAGGCGAATTCCCTGAAACACGCGAAAA 647
BSNT_02432___ 648 AATGAGCGGTATCCGTAAAGCAATTGCAAAAGCGATGGTTAACTCTAAAC 697
|||||||||||||||||||||.||.||.|||||.|||||.||||||||.|
RBAM_014440__ 648 AATGAGCGGTATCCGTAAAGCGATCGCGAAAGCAATGGTGAACTCTAAGC 697
BSNT_02432___ 698 ACACTGCTCCTCATGTAACGTTAATGGACGAAGTGGACGTAACAAACCTT 747
|.|||||.||.||.|||||..|.|||||.|||||.|||||||||||.|||
RBAM_014440__ 698 ATACTGCACCGCACGTAACTCTTATGGATGAAGTTGACGTAACAAATCTT 747
BSNT_02432___ 748 GTTGCACATCGTAAACAGTTCAAACAAGTTGCTGCTGATCAAGGAATCAA 797
|||||.||.||.||||||||||||||||||||||||||||||||.|||||
RBAM_014440__ 748 GTTGCTCACCGCAAACAGTTCAAACAAGTTGCTGCTGATCAAGGCATCAA 797
BSNT_02432___ 798 GCTGACTTACTTGCCTTACGTTGTAAAAGCTCTTACATCTGCACTGAAAA 847
|||||||||..||||||||||.||.|||||..|.|||||.||..||||||
RBAM_014440__ 798 GCTGACTTATCTGCCTTACGTCGTCAAAGCATTAACATCCGCTTTGAAAA 847
BSNT_02432___ 848 AATTCCCTGTTTTAAACACGTCAATTGACGATAAAACAGATGAAGTCATC 897
|||||||||||||||||||.||.|||||.|||||||||||||||||.|||
RBAM_014440__ 848 AATTCCCTGTTTTAAACACATCTATTGATGATAAAACAGATGAAGTGATC 897
BSNT_02432___ 898 CAAAAACATTACTTCAACATCGGTATCGCTGCTGACACTGAAAAAGGCTT 947
|||||||||||||||||||||||.||.||.||.||.||.|||||||||.|
RBAM_014440__ 898 CAAAAACATTACTTCAACATCGGAATTGCAGCGGATACCGAAAAAGGCCT 947
BSNT_02432___ 948 GCTTGTACCGGTTGTGAAAAATGCAGATCGTAAATCTGTCTTTGAAATTT 997
||||||.|||||.|||||||||||.||.||||||.|.||.||.|||||.|
RBAM_014440__ 948 GCTTGTGCCGGTAGTGAAAAATGCCGACCGTAAAGCCGTTTTCGAAATCT 997
BSNT_02432___ 998 CTGATGAGATCAATGGCCTTGCAACAAAAGCTCGTGAAGGCAAGCTTGCT 1047
|||||||.|||||..|||||||.||||||||.|||||||||||||||||.
RBAM_014440__ 998 CTGATGAAATCAACAGCCTTGCTACAAAAGCGCGTGAAGGCAAGCTTGCA 1047
BSNT_02432___ 1048 CCAGCTGAAATGAAAGGCGCATCTTGCACAATTACAAACATCGGTTCTGC 1097
||.||.||||||||||||||.||||||||.||.|||||.|||||||||||
RBAM_014440__ 1048 CCTGCGGAAATGAAAGGCGCTTCTTGCACGATCACAAATATCGGTTCTGC 1097
BSNT_02432___ 1098 CGGCGGACAATGGTTCACTCCGGTTATCAACCATCCAGAAGTTGCGATTC 1147
|||.||.|||||||||||.||||||||||||||||||||.||||||||||
RBAM_014440__ 1098 CGGAGGCCAATGGTTCACACCGGTTATCAACCATCCAGAGGTTGCGATTC 1147
BSNT_02432___ 1148 TTGGTATCGGACGCATTGCAGAAAAAGCGATTGTTCGTGATGGCGAAATC 1197
|.||||||||.||.|||||.||||||||.||.||.|||||.||.|||||.
RBAM_014440__ 1148 TCGGTATCGGCCGTATTGCTGAAAAAGCAATCGTCCGTGACGGTGAAATT 1197
BSNT_02432___ 1198 GTAGCAGCTCCAGTCTTAGCTCTTTCTCTCAGCTTCGACCACCGTATGAT 1247
|||||.|||||.|||||||||||||||||||||||.||||||||||||||
RBAM_014440__ 1198 GTAGCTGCTCCTGTCTTAGCTCTTTCTCTCAGCTTTGACCACCGTATGAT 1247
BSNT_02432___ 1248 CGACGGAGCAACTGCGCAAAATGCATTAAATCACATCAAGCGTTTACTGA 1297
.||||||||||||||.||||||||.|||||.|||||||||||||||||||
RBAM_014440__ 1248 TGACGGAGCAACTGCACAAAATGCGTTAAACCACATCAAGCGTTTACTGA 1297
BSNT_02432___ 1298 ACGATCCACAATTAATTTTAATGGAGGCGTAA 1329
|||||||||||.|.||||||||||||||||||
RBAM_014440__ 1298 ACGATCCACAACTTATTTTAATGGAGGCGTAA 1329
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