Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02433 and RBAM_014450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:10
# Commandline: needle
# -asequence dna-align/BSNT_02433___pdhD.1.9828.seq
# -bsequence dna-align/RBAM_014450___pdhD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02433___pdhD-RBAM_014450___pdhD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02433___pdhD-RBAM_014450___pdhD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02433___pdhD
# 2: RBAM_014450___pdhD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1413
# Identity: 1272/1413 (90.0%)
# Similarity: 1272/1413 (90.0%)
# Gaps: 0/1413 ( 0.0%)
# Score: 5796.0
#
#
#=======================================
BSNT_02433___ 1 ATGGTAGTAGGAGATTTCCCTATTGAAACAGATACTCTTGTAATTGGTGC 50
|||||||||||||||||||||||||||||||||||||||||.||||||||
RBAM_014450__ 1 ATGGTAGTAGGAGATTTCCCTATTGAAACAGATACTCTTGTGATTGGTGC 50
BSNT_02433___ 51 GGGACCTGGCGGCTATGTAGCTGCCATCCGCGCTGCACAGCTTGGACAAA 100
||||||.|||||||||||||||||||||||||||||.|||||||||||||
RBAM_014450__ 51 GGGACCCGGCGGCTATGTAGCTGCCATCCGCGCTGCTCAGCTTGGACAAA 100
BSNT_02433___ 101 AAGTAACAGTCGTTGAAAAAGCAACTCTTGGAGGCGTTTGTCTGAACGTT 150
|||||||||||||||||||||||||||||||||||||||||||||||||.
RBAM_014450__ 101 AAGTAACAGTCGTTGAAAAAGCAACTCTTGGAGGCGTTTGTCTGAACGTC 150
BSNT_02433___ 151 GGATGTATCCCTTCAAAAGCGCTGATCAATGCAGGTCACCGTTATGAGAA 200
||.|||||.||||||||||||||.|||||||||||.||.|||||.|||||
RBAM_014450__ 151 GGCTGTATTCCTTCAAAAGCGCTCATCAATGCAGGCCATCGTTACGAGAA 200
BSNT_02433___ 201 TGCAAAACATTCTGATGACATGGGAATCACTGCTGAGAATGTAACAGTTG 250
||||||||||||.|||||||||||.||||||||||||||.|||||.||||
RBAM_014450__ 201 TGCAAAACATTCAGATGACATGGGGATCACTGCTGAGAACGTAACGGTTG 250
BSNT_02433___ 251 ATTTCACAAAAGTTCAAGAATGGAAAGCTTCTGTTGTCAACAAGCTTACT 300
|.||.||||||||.|||||||||||||||||||||||.||.||||||||.
RBAM_014450__ 251 ACTTTACAAAAGTCCAAGAATGGAAAGCTTCTGTTGTAAATAAGCTTACC 300
BSNT_02433___ 301 GGCGGTGTAGCAGGTCTTCTTAAAGGCAACAAAGTAGATGTTGTAAAAGG 350
||||||||.|||||||||.|.|||||.||.|||||.||.|||.|||||||
RBAM_014450__ 301 GGCGGTGTTGCAGGTCTTTTAAAAGGAAATAAAGTGGACGTTATAAAAGG 350
BSNT_02433___ 351 TGAAGCTTACTTTGTAGACAGCAATTCAGTTCGTGTTATGGATGAGAACT 400
.||||||||.||.|||||||||||.||.||.||.||.|||||||||||||
RBAM_014450__ 351 GGAAGCTTATTTCGTAGACAGCAACTCTGTCCGCGTAATGGATGAGAACT 400
BSNT_02433___ 401 CTGCTCAAACATACACGTTCAAAAATGCAATCATCGCTACTGGATCTCGT 450
||||.|||||||||||.||.|||||.||||||||.|||||.||.|||||.
RBAM_014450__ 401 CTGCGCAAACATACACATTTAAAAACGCAATCATTGCTACCGGTTCTCGC 450
BSNT_02433___ 451 CCTATCGAATTGCCAAACTTCAAATATAGTGAGCGTGTCCTGAATTCAAC 500
|||||||||||||||||||||||||||||.||.||.||.|||||.||.||
RBAM_014450__ 451 CCTATCGAATTGCCAAACTTCAAATATAGCGAACGCGTTCTGAACTCTAC 500
BSNT_02433___ 501 TGGAGCTTTGGCTCTTAAAGAAATTCCTAAAAAGCTCGTTGTTATCGGCG 550
.||.||..|.||.||||||||||||||.||||||||||||||||||||||
RBAM_014450__ 501 AGGCGCACTTGCGCTTAAAGAAATTCCGAAAAAGCTCGTTGTTATCGGCG 550
BSNT_02433___ 551 GCGGATACATCGGAACTGAACTTGGAACTGCGTATGCTAACTTCGGTACT 600
|||||||.|||||.|||||.||||||||.||||||||.||||||||.|||
RBAM_014450__ 551 GCGGATATATCGGTACTGAGCTTGGAACAGCGTATGCGAACTTCGGAACT 600
BSNT_02433___ 601 GAACTTGTTATTCTTGAAGGCGGAGATGAAATTCTTCCTGGCTTCGAAAA 650
|||.|.||||||.|.|||||||||||||||||||||||||||||||||||
RBAM_014450__ 601 GAATTGGTTATTTTAGAAGGCGGAGATGAAATTCTTCCTGGCTTCGAAAA 650
BSNT_02433___ 651 ACAAATGAGTTCTCTCGTTACACGCAGACTGAAGAAAAAAGGCAACGTTG 700
|||||||||||||||||||||.||||||||||||||||||||||||||||
RBAM_014450__ 651 ACAAATGAGTTCTCTCGTTACCCGCAGACTGAAGAAAAAAGGCAACGTTG 700
BSNT_02433___ 701 AAATCCATACAAACGCGATGGCTAAAGGCGTTGAAGAAAGACCAGACGGC 750
||||||||||||.|||.|||||||||||||||||.||||||||.||||||
RBAM_014450__ 701 AAATCCATACAAGCGCCATGGCTAAAGGCGTTGAGGAAAGACCTGACGGC 750
BSNT_02433___ 751 GTAACAGTTACTTTCGAAGTAAAAGGCGAAGAAAAAACGGTTGATGCTGA 800
|||||||||||.||||||||||||||||||||||||||||||||||||||
RBAM_014450__ 751 GTAACAGTTACATTCGAAGTAAAAGGCGAAGAAAAAACGGTTGATGCTGA 800
BSNT_02433___ 801 TTACGTATTGATTACAGTAGGACGCCGTCCAAACACTGATGAGCTTGGTC 850
|||||||||.||.||.||.|||||||||||.||||||||||||||.||.|
RBAM_014450__ 801 TTACGTATTAATCACTGTCGGACGCCGTCCGAACACTGATGAGCTCGGCC 850
BSNT_02433___ 851 TTGAGCAAGTCGGTATCGAAATGACGGACCGCGGTATTGTGAAAACTGAC 900
|||||||||||||||||||||||||.|||||||||.|..|.|||||.|||
RBAM_014450__ 851 TTGAGCAAGTCGGTATCGAAATGACTGACCGCGGTGTCATTAAAACAGAC 900
BSNT_02433___ 901 AAACAGTGCCGCACAAACGTACCTAACATTTATGCAATCGGTGATATCAT 950
||.||||||||||||||||||||.||||||||.|||||||||||.|||||
RBAM_014450__ 901 AAGCAGTGCCGCACAAACGTACCGAACATTTACGCAATCGGTGACATCAT 950
BSNT_02433___ 951 CGAAGGACCGCCGCTTGCTCATAAAGCATCTTACGAAGGTAAAATCGCTG 1000
.||.|||||.||..|.|||||.|||||.||||||||||||||||||||||
RBAM_014450__ 951 TGACGGACCTCCATTGGCTCACAAAGCGTCTTACGAAGGTAAAATCGCTG 1000
BSNT_02433___ 1001 CAGAAGCTATCGCTGGAGAGCCTGCAGAAATCGATTACCTTGGTATTCCT 1050
|.||||||||..|.||||||||.||.||||||||||||||.||||||||.
RBAM_014450__ 1001 CCGAAGCTATTTCAGGAGAGCCGGCTGAAATCGATTACCTCGGTATTCCG 1050
BSNT_02433___ 1051 GCGGTTGTTTTCTCTGAGCCTGAACTTGCATCAGTTGGTTACACTGAAGC 1100
||||||||.|||||||||||||||||.||.||.||.||||||||||||||
RBAM_014450__ 1051 GCGGTTGTATTCTCTGAGCCTGAACTGGCTTCTGTCGGTTACACTGAAGC 1100
BSNT_02433___ 1101 ACAGGCGAAAGAAGAAGGTCTTGACATTGTTGCTGCTAAATTCCCATTTG 1150
|||||||||||||||||||.||||..|.|||||.|||||.|||||.||||
RBAM_014450__ 1101 ACAGGCGAAAGAAGAAGGTATTGAAGTCGTTGCAGCTAAGTTCCCGTTTG 1150
BSNT_02433___ 1151 CAGCAAACGGCCGCGCGCTTTCTCTTAACGAAACAGACGGCTTCATGAAG 1200
||||||||||.||.|||||.||||||||||||||.|||||||||||||||
RBAM_014450__ 1151 CAGCAAACGGACGTGCGCTGTCTCTTAACGAAACTGACGGCTTCATGAAG 1200
BSNT_02433___ 1201 CTGATCACTCGTAAAGAGGACGGTCTTGTGATCGGTGCGCAAATCGCCGG 1250
|||||||||||||||||.|||||||||||.||||||||||||||.|||||
RBAM_014450__ 1201 CTGATCACTCGTAAAGAAGACGGTCTTGTAATCGGTGCGCAAATTGCCGG 1250
BSNT_02433___ 1251 AGCAAGTGCTTCTGATATGATTTCTGAATTAAGCCTAGCGATTGAAGGCG 1300
.|||||.||||||||.||||||||||||||.|||||.|||||.|||||||
RBAM_014450__ 1251 CGCAAGCGCTTCTGACATGATTTCTGAATTGAGCCTGGCGATCGAAGGCG 1300
BSNT_02433___ 1301 GCATGACTGCTGAAGATATCGCGATGACAATTCACGCTCACCCAACATTG 1350
|.||||||||||||||||||||.||||||||||||||||||||.||||||
RBAM_014450__ 1301 GAATGACTGCTGAAGATATCGCAATGACAATTCACGCTCACCCGACATTG 1350
BSNT_02433___ 1351 GGCGAAATCACAATGGAAGCTGCTGAAGTGGCAATCGGAAGTCCGATTCA 1400
|||||||||||.||||||||.||.|||||.|||||||||||.|||||.||
RBAM_014450__ 1351 GGCGAAATCACTATGGAAGCGGCCGAAGTAGCAATCGGAAGCCCGATCCA 1400
BSNT_02433___ 1401 CATCGTAAAATAA 1413
.||||||||||||
RBAM_014450__ 1401 TATCGTAAAATAA 1413
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