Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02434 and RBAM_014460

See Amino acid alignment / Visit BSNT_02434 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:10
# Commandline: needle
#    -asequence dna-align/BSNT_02434___slp.1.9828.seq
#    -bsequence dna-align/RBAM_014460___slp.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02434___slp-RBAM_014460___slp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02434___slp-RBAM_014460___slp.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02434___slp
# 2: RBAM_014460___slp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity:     277/384 (72.1%)
# Similarity:   277/384 (72.1%)
# Gaps:          18/384 ( 4.7%)
# Score: 991.5
# 
#
#=======================================

BSNT_02434___      1 ATGCGATATCGCGCGGT-ATTCCC--------CATGCTGATAATAGTATT     41
                     |||||.||.||..|||| ||||||        .||||||         ||
RBAM_014460__      1 ATGCGCTACCGTACGGTGATTCCCTTTTTTTTGATGCTG---------TT     41

BSNT_02434___     42 TGCTTTATCGGGCTGTACGCTTTCCACCATCAATCCGATGAAAAAAAGCC     91
                     .|.|.|.||..|||||.||.||||.||..|||.|||..|.|.|||||.||
RBAM_014460__     42 CGTTCTGTCAAGCTGTTCGGTTTCTACTGTCAGTCCATTCACAAAAAACC     91

BSNT_02434___     92 GGATTGACAACATTCATCATACACAAATCCTGTTTTTTTCTGATGAGAAC    141
                     ||||.||||.|||||||||.||.||||||.||||||||||.|||||.||.
RBAM_014460__     92 GGATCGACAGCATTCATCACACTCAAATCTTGTTTTTTTCCGATGAAAAT    141

BSNT_02434___    142 CAAATAGACCAGGAAGCGCCTTATTACGATGCACTGCTTGATTTAGAAAA    191
                     ||.|||||..|.||||.|||||||||||||||..|.||||||||||||||
RBAM_014460__    142 CATATAGATAAAGAAGTGCCTTATTACGATGCGATCCTTGATTTAGAAAA    191

BSNT_02434___    192 AGATTATCCCGAGCAAATAGATAAAATGAAGGTCTATGATAAAAAAGAAG    241
                     ..|.||||||.|.||..|.|||.||||||||||.|||||.||.|.|.|.|
RBAM_014460__    192 GAAATATCCCCATCATGTCGATCAAATGAAGGTTTATGACAACAGAAAGG    241

BSNT_02434___    242 GCTGGGAAGATGAGATTGAAACTGTCCCTACCCTTATGGTTGTTGATCAG    291
                     |.||||||||.||.||..|.||..|||||.|.||.|||||..|..||||.
RBAM_014460__    242 GATGGGAAGAGGAAATCAACACGTTCCCTGCGCTGATGGTGATCAATCAT    291

BSNT_02434___    292 CGCCATGTCGTGGTGAAAATCGAGGGATGTGTGAAAAAGAAAGAAGACAT    341
                     ||.|||||.||..||||.||.|||||||..||.||.||.|||||.||.||
RBAM_014460__    292 CGGCATGTGGTCATGAAGATTGAGGGATCCGTAAAGAAAAAAGAGGATAT    341

BSNT_02434___    342 CATTAAACCATTACAGCATGTGCTGTCAAAATAA    375
                     |||.|||||..|.|||||||||||..||.|||||
RBAM_014460__    342 CATCAAACCTATGCAGCATGTGCTTGCACAATAA    375


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