Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02463 and RBAM_014670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:12
# Commandline: needle
# -asequence dna-align/BSNT_02463___ylaK.1.9828.seq
# -bsequence dna-align/RBAM_014670___ylaK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02463___ylaK-RBAM_014670___ylaK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02463___ylaK-RBAM_014670___ylaK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02463___ylaK
# 2: RBAM_014670___ylaK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1339
# Identity: 1048/1339 (78.3%)
# Similarity: 1048/1339 (78.3%)
# Gaps: 20/1339 ( 1.5%)
# Score: 4060.5
#
#
#=======================================
BSNT_02463___ 1 TTGAGTAAAATTTATGTGTTAGATACGAATGTGTTATTACAGGATCCTAA 50
||||||||||||||.|||||||||||||||||..|.||.|||||||||||
RBAM_014670__ 1 TTGAGTAAAATTTACGTGTTAGATACGAATGTACTTTTGCAGGATCCTAA 50
BSNT_02463___ 51 CGCGATATTTTCTTTTGAAGAAAATGAGGTTGTCATCCCTGCTGTCGTTT 100
|||.||.|||||.|||||||||||.||.|||||||||||.||.|||||..
RBAM_014670__ 51 CGCCATTTTTTCCTTTGAAGAAAACGAAGTTGTCATCCCCGCCGTCGTGC 100
BSNT_02463___ 101 TAGAAGAGGTTGATTCAAAAAAACGGTATATGGACGAAGTTGGGAGGAAT 150
|.||||||||.|||||||||||.||||||||||||||.||.|||||.|||
RBAM_014670__ 101 TGGAAGAGGTCGATTCAAAAAAGCGGTATATGGACGAGGTCGGGAGAAAT 150
BSNT_02463___ 151 GCAAGGCACGTATCTAAGCTAATCGATGCGCTAAGACAAAAGGGCAGGCT 200
||.|||||||||||||||||.||.||.|.|||.||..|.||.||.|||||
RBAM_014670__ 151 GCGAGGCACGTATCTAAGCTGATAGACGGGCTCAGGGAGAAAGGAAGGCT 200
BSNT_02463___ 201 GCATGAGCATGTACCGCTTGACACCGGCGGCACACTGAGAATTGAACTGA 250
|||.|||.|.||.||||||||.|.|||.||.||.||.|||||||||||||
RBAM_014670__ 201 GCACGAGAAAGTTCCGCTTGAAAGCGGAGGAACGCTCAGAATTGAACTGA 250
BSNT_02463___ 251 ATCATCGTTCGTTTCACCAGCTGCAAGAGATCTTTATTGAAAAGACGAAC 300
|.||.||.||.|||||||||||.|||||.||.|||||.|||||.|||||.
RBAM_014670__ 251 ACCACCGGTCATTTCACCAGCTCCAAGAAATTTTTATCGAAAAAACGAAT 300
BSNT_02463___ 301 GATAATCGCATATTAGCCGTTGCGAAAAACTTGAGCCTAGAGGAAGAAAC 350
|||||.|||||.||.||.||.||.|||||.||.|||||.|||||.|||||
RBAM_014670__ 301 GATAACCGCATTTTGGCGGTGGCAAAAAATTTAAGCCTTGAGGAGGAAAC 350
BSNT_02463___ 351 CAAGGAAAATGGCAGGCCGGTTATCCTCGTCAGTAAGGATGTACTGGTCA 400
.||.|||||.|||.|.|..||.|||||.|||||.||.|||||.||.||||
RBAM_014670__ 351 GAAAGAAAACGGCCGCCTCGTCATCCTGGTCAGCAAAGATGTGCTTGTCA 400
BSNT_02463___ 401 GGGTTAAAGCCGACGCAATCGGACTGCTTGCTGAAGATTTCTTGAATGAC 450
||||.||.||.||.||.|||||.||..|.||.||.||.||.||.||.|||
RBAM_014670__ 401 GGGTAAAGGCGGATGCCATCGGGCTTTTGGCGGAGGACTTTTTAAACGAC 450
BSNT_02463___ 451 CGGGTTGTGGACAATGATGAAATGTACAGCGGCTATAAAGATTTATATAT 500
.|.||.||.|||.||||||||||.||.|||||.||.||||||.|||.|||
RBAM_014670__ 451 AGAGTCGTTGACCATGATGAAATATATAGCGGGTACAAAGATATATTTAT 500
BSNT_02463___ 501 CAGCCAGCAGCTGTTCAGCTCTTTTTACGGGAAA---AATCAAATTTCAG 547
.|...|..|||.|||...|||.||||| .||| ||.||||||||||
RBAM_014670__ 501 GAATAAAGAGCGGTTTGCCTCGTTTTA---TAAAGACAAACAAATTTCAG 547
BSNT_02463___ 548 TAAACGATGTGAAACAGCATGCGTTTTATCCGAATCAGTTTGCTTTAATG 597
|.||.||..|..|.|.||||..|.|||||||||||||.||||...|.|||
RBAM_014670__ 548 TCAAGGAGCTTCAGCGGCATCAGGTTTATCCGAATCAATTTGTGCTGATG 597
BSNT_02463___ 598 AAGGATGAGCTAGGAGGGTCCTCCTCGGCAGTCGGAATTGCAGACAAAA- 646
||.|||||..|||||||.||.||.||.||.|||||.||..||||.||.|
RBAM_014670__ 598 AAAGATGAATTAGGAGGATCTTCGTCTGCGGTCGGCATGACAGATAAGAA 647
BSNT_02463___ 647 ---CCGGAACGGTATTAAAAAGACTCGTATTTGATGATGAACATATATGG 693
|..||.|| |||||||||||||.||.||||||||.||..|||||
RBAM_014670__ 648 AGGCGAGACCG----TAAAAAGACTCGTTTTCGATGATGAGCACGTATGG 693
BSNT_02463___ 694 GGAATCAGGCCGAAAAATGTACAGCAGACAATGGCTTTAGAGCTTTTGCT 743
||||||||||||||.||.||.||||||||||||||..|.||.||..||||
RBAM_014670__ 694 GGAATCAGGCCGAAGAACGTCCAGCAGACAATGGCGCTTGAACTCCTGCT 743
BSNT_02463___ 744 GCGGGAAGATATTCCGCTTGTCACCCTGATCGGAAAAGCAGGAACCGGCA 793
|.||||||||||.|||||.||||||||||||||||||||.|||||.||.|
RBAM_014670__ 744 GAGGGAAGATATCCCGCTCGTCACCCTGATCGGAAAAGCGGGAACGGGAA 793
BSNT_02463___ 794 AAACGCT--CTTAACTTTGGCGGCAGGGCTATTACAGACAGAAGACTTGG 841
|||| || ||| .||.|.|||||||||||..|.|||||.||.||..|.|
RBAM_014670__ 794 AAAC-CTTGCTT-GCTCTCGCGGCAGGGCTTCTGCAGACGGAGGATCTCG 841
BSNT_02463___ 842 GAATATATAAAAAGCTGGTTGTCGCAAGGCCGATTGTTCCTGTTGGCAAG 891
|.||.||||||||.|||.|.|||||..|.||.||.||.||.||.||.|||
RBAM_014670__ 842 GTATTTATAAAAAACTGATCGTCGCGCGTCCCATCGTCCCGGTGGGAAAG 891
BSNT_02463___ 892 GACATCGGGTATTTGCCAGGTGAAAAAGAGGAAAAGCTAAAGCCTTGGAT 941
||.|||||.||||||||.||.|||||||||||||||||.|||||.|||||
RBAM_014670__ 892 GATATCGGATATTTGCCTGGCGAAAAAGAGGAAAAGCTCAAGCCGTGGAT 941
BSNT_02463___ 942 GCAGCCGATTTTTGACAA-CTTAGAGTTTCTGTTTAATGCAAAAAAACCA 990
|||||||||.|||||.|| ||| ||.|||.|.||.|||||.|||||.||.
RBAM_014670__ 942 GCAGCCGATCTTTGATAATCTT-GAATTTTTATTCAATGCGAAAAAGCCG 990
BSNT_02463___ 991 GGGGAGCTTGATGCTATTTTGGCGGGAATTGGCTCAATTCAGGTAGAGGC 1040
||.||.|||||.||.||||||||.|||||.||.||.||||||||.|||||
RBAM_014670__ 991 GGTGAACTTGAAGCGATTTTGGCAGGAATCGGATCGATTCAGGTGGAGGC 1040
BSNT_02463___ 1041 GCTGACTTATATCAGAGGGAGAAGCATTCCAGATCAATTTATTATCATTG 1090
||||||.||.||..|.||||||||||||||.|||||.||||||||.||||
RBAM_014670__ 1041 GCTGACATACATTCGGGGGAGAAGCATTCCGGATCAGTTTATTATTATTG 1090
BSNT_02463___ 1091 ATGAAGCGCAAAATTTGACCAGGCATGAGGTGAAAACGTTGCTGACGAGA 1140
||||.||.||.||||||||.|||||.|||||.||||||.|..||||..|.
RBAM_014670__ 1091 ATGAGGCTCAGAATTTGACGAGGCACGAGGTCAAAACGCTTTTGACTCGG 1140
BSNT_02463___ 1141 GTCGGTGAAGGCAGTAAAATTGTCTTAATGGGTGACCCTGAACAAATTGA 1190
||.||.||.|||||.|||||||||.|.|||||.||.||.||.|||||.||
RBAM_014670__ 1141 GTGGGAGAGGGCAGCAAAATTGTCCTGATGGGCGATCCGGAGCAAATAGA 1190
BSNT_02463___ 1191 TCACCCATATTTAGACAGTCTGAACAATGGTTTGGCCTATGTGGTTGAGC 1240
|||||||||.|||||||||.|.|||||.||..|.||.||||||||.||.|
RBAM_014670__ 1191 TCACCCATACTTAGACAGTTTAAACAACGGACTTGCTTATGTGGTAGAAC 1240
BSNT_02463___ 1241 GGTTTAAAGGACAACCCATCTCAGGCAGCGTGAAGCTGTTAAAAGGTGAG 1290
|||||||||.||||.||.||||.||||||||||||||..|.|||||||||
RBAM_014670__ 1241 GGTTTAAAGAACAAACCGTCTCCGGCAGCGTGAAGCTTGTGAAAGGTGAG 1290
BSNT_02463___ 1291 AGATCAGGTCTCGCCCAGCTCGCAGCTGATTTGCTGTAA 1329
|||||.||.||.||.|||||.||.||.||||||.|.|||
RBAM_014670__ 1291 AGATCCGGCCTTGCACAGCTTGCCGCCGATTTGTTATAA 1329
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