Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02465 and RBAM_014690
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:12
# Commandline: needle
# -asequence dna-align/BSNT_02465___ylaM.1.9828.seq
# -bsequence dna-align/RBAM_014690___ylaM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02465___ylaM-RBAM_014690___ylaM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02465___ylaM-RBAM_014690___ylaM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02465___ylaM
# 2: RBAM_014690___ylaM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 938
# Identity: 721/938 (76.9%)
# Similarity: 721/938 (76.9%)
# Gaps: 16/938 ( 1.7%)
# Score: 2717.0
#
#
#=======================================
BSNT_02465___ 1 ATGGTATGCCGGCATAATGATGAGCTTGAAGCCTTAGT----GAAAAAGG 46
|||||||||||||||.|..|.|||||.||.||.||||| ||| |
RBAM_014690__ 1 ATGGTATGCCGGCATTACCAAGAGCTGGACGCATTAGTTCAGGAA----G 46
BSNT_02465___ 47 CGAAAAAAGTAACGGACAAGGGGGAGGTAGCCAG-CTATATTCCCGCCTT 95
||||||||..|||.||..|.||..|.|| |.||| |||||||||.||..|
RBAM_014690__ 47 CGAAAAAAAGAACCGAAGAAGGCAAAGT-GGCAGACTATATTCCGGCTCT 95
BSNT_02465___ 96 GGCAAAAGCTGATAAACACGACCTGTCAGTGGCGATTTATTATTCCAATA 145
|||..||.||||..||.||..|||.||.||..|.||||||.||.|..|.|
RBAM_014690__ 96 GGCTGAATCTGAACAAGACAGCCTTTCGGTCACAATTTATCATGCGGAAA 145
BSNT_02465___ 146 ATGTTTGTCTGTCAGCAGGTGACGTAGAAAAAACATTTACGCTTCAAAGT 195
||...||||||.|.|||||.||||..||....|||||||||||.||.||.
RBAM_014690__ 146 ATACATGTCTGACGGCAGGAGACGCCGACCGGACATTTACGCTGCAGAGC 195
BSNT_02465___ 196 ATATCGAAAGTCCTTTCCCTTGCTTTGGTGTTAATGGAATACGGCAAAGA 245
||.||||||||.|||||.||.||..|.||..|.|||||.|||||.||.||
RBAM_014690__ 196 ATTTCGAAAGTGCTTTCTCTGGCGCTCGTACTGATGGATTACGGAAAGGA 245
BSNT_02465___ 246 TAAGGTCTTTAGTTATGTTGGACAGGAGCCGACCGGAGATCCGTTTAATT 295
.|||||.||.||.|..||.||.||||||||||||||.||.||||||||||
RBAM_014690__ 246 AAAGGTGTTCAGCTGCGTGGGTCAGGAGCCGACCGGCGACCCGTTTAATT 295
BSNT_02465___ 296 CAATTATCAAGCTCGAAACAGTGAATCCAAGCAAGCCGTTAAATCCTATG 345
|.||.||.|||||.||||||||||||||..|||||||.||||||||.|||
RBAM_014690__ 296 CCATGATTAAGCTTGAAACAGTGAATCCGGGCAAGCCTTTAAATCCGATG 345
BSNT_02465___ 346 ATTAATGCCGGGGCATTGGTAGTGACAAGTCTGATAAGAGGAAGAA--CG 393
||||||||.||.||..|.||.||.||..||.|.||.|.||| |.| ||
RBAM_014690__ 346 ATTAATGCGGGCGCTCTCGTCGTTACGGGTTTCATTAAAGG--GCATTCG 393
BSNT_02465___ 394 GTGAAAGAGAGACTTGATTATTTGCTTTCTTTTATCAGAAGGCTGACAAA 443
..||||||..|.||.|||||..||||....|||||||||||.||..|.||
RBAM_014690__ 394 CCGAAAGACCGCCTGGATTACCTGCTCGGATTTATCAGAAGACTTGCGAA 443
BSNT_02465___ 444 CAACCAAGAGATTACATACTGCCGGGAAGTGGCTGAATCTGAATACAGCA 493
.||.||.||.||||||||.|||.|..|.||.||.|||||.||||.|||..
RBAM_014690__ 444 TAATCAGGACATTACATATTGCAGACATGTCGCGGAATCGGAATTCAGTT 493
BSNT_02465___ 494 CTTCAATGATTAATCGGGCAATGTGCTATTATATGAAGCAGTACGGCATT 543
|.||.||||||||||||||.|||||.|||||.|||||||||||.|.||||
RBAM_014690__ 494 CATCCATGATTAATCGGGCCATGTGTTATTACATGAAGCAGTATGACATT 543
BSNT_02465___ 544 TTTGAAGATGATGTAGAAGCAGTAATGGATTTATACACGAAGCAATGCGC 593
|||||||..||||||||||..||.||||||.|.||.||.||.||.|||||
RBAM_014690__ 544 TTTGAAGGCGATGTAGAAGAGGTCATGGATCTGTATACAAAACAGTGCGC 593
BSNT_02465___ 594 GATTGAGATGAACAGCTTGGATTTAGCGAAAATCGGATCTGTATTTG-CA 642
||||.||||||.|||..||||.|||||.||||||||.|..|||||.| |.
RBAM_014690__ 594 GATTAAGATGAGCAGTCTGGACTTAGCCAAAATCGGCTGCGTATTCGCCC 643
BSNT_02465___ 643 TTGAACGGCAGACATCCAGAGACTGGGGAGCAAGTCATCTCAAAAGATGT 692
||| ||||||..|||||.||.||.||||||||.|||||...|||||||||
RBAM_014690__ 644 TTG-ACGGCAAGCATCCGGAAACCGGGGAGCAGGTCATTAAAAAAGATGT 692
BSNT_02465___ 693 CGCTAGAATTTGCAAAACATTTATGGTGACGTGCGGAATGTACAATGCAA 742
.||.|||||.|||||.||.|||||||||||.|||||.|||||||||||.|
RBAM_014690__ 693 GGCGAGAATCTGCAAGACGTTTATGGTGACATGCGGCATGTACAATGCGA 742
BSNT_02465___ 743 GCGGGGAATTCGCAATTAAGGTCGGAATTCCTGCGAAAAGCGGCGTATCC 792
|||||||||||||.|||||||||||.|||||.||.|||||||||||.||.
RBAM_014690__ 743 GCGGGGAATTCGCGATTAAGGTCGGCATTCCCGCTAAAAGCGGCGTTTCG 792
BSNT_02465___ 793 GGCGGGATTATGGGCATTTCGCCTTACGATTTCGGGATCGGCATATTCGG 842
||.|||||.||||||||||||||.|||.|.|||||.|||||.||||||||
RBAM_014690__ 793 GGAGGGATCATGGGCATTTCGCCGTACAACTTCGGAATCGGTATATTCGG 842
BSNT_02465___ 843 CCCCGCATTAGACGAAAAAGGGAACAGCATTGCAGGTGTAAAGCTTTTGG 892
|||.||..|.||.||||||||.||||||||.||.|||||.||||||||||
RBAM_014690__ 843 CCCGGCGCTTGATGAAAAAGGCAACAGCATCGCGGGTGTGAAGCTTTTGG 892
BSNT_02465___ 893 AAATAATGTCTGAGATGTACAGGCTGAGTATTTTTTAA 930
||||.||||||||||..|||||||||||||||||||.|
RBAM_014690__ 893 AAATCATGTCTGAGAAATACAGGCTGAGTATTTTTTGA 930
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