Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02475 and RBAM_014750

See Amino acid alignment / Visit BSNT_02475 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:13
# Commandline: needle
#    -asequence dna-align/BSNT_02475___ctaC.1.9828.seq
#    -bsequence dna-align/RBAM_014750___ctaC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02475___ctaC-RBAM_014750___ctaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02475___ctaC-RBAM_014750___ctaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02475___ctaC
# 2: RBAM_014750___ctaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1074
# Identity:     856/1074 (79.7%)
# Similarity:   856/1074 (79.7%)
# Gaps:           6/1074 ( 0.6%)
# Score: 3382.0
# 
#
#=======================================

BSNT_02475___      1 ATGGTAAAGCATTGGCGTCTTATTTTATTATTAGCCTTAGTGCCGCTTCT     50
                     |||.||||||.||||||||||.|.|.||||||||||||||||||||||.|
RBAM_014750__      1 ATGTTAAAGCGTTGGCGTCTTTTATCATTATTAGCCTTAGTGCCGCTTTT     50

BSNT_02475___     51 ATTAAGCGGATGTGGAAAACCTTTTTTATCCACGCTCAAGCCTGCTGGCG    100
                     |||.|||||.|||||||||||.|||.|.|||||.|||||||||||.||||
RBAM_014750__     51 ATTGAGCGGCTGTGGAAAACCGTTTCTGTCCACACTCAAGCCTGCCGGCG    100

BSNT_02475___    101 AGGTGGCTGATAAACAGTTTGACCTGACAGTGCTCAGCACATTGATTATG    150
                     |.||||||||||||||.|.|||.|||||.||||||||||||.|.||.|||
RBAM_014750__    101 AAGTGGCTGATAAACAATATGATCTGACGGTGCTCAGCACACTTATCATG    150

BSNT_02475___    151 GTGGTTGTTGTTGCAGTAGTATCTGTTATCTTCTTTTATGTGATTGTGAG    200
                     ||.||.||.|||||.||.|||.|.|||||.||||||||.||.||||||||
RBAM_014750__    151 GTTGTCGTCGTTGCGGTCGTAGCAGTTATTTTCTTTTACGTCATTGTGAG    200

BSNT_02475___    201 ATTCAGAAGATCACGGGTCGGTGAGAACACGATACCGAAACAGGTAGAGG    250
                     |||||||.|.||.||..|.||.||..|||||||||||||||||||.||||
RBAM_014750__    201 ATTCAGACGGTCGCGTATAGGGGAAGACACGATACCGAAACAGGTGGAGG    250

BSNT_02475___    251 GGAATAAATTTTTAGAAATCACATGGACCGTGATCCCGATTTTGCTGCTC    300
                     ||||....||||||||||||||.||||||||.||.|||||..||||.||.
RBAM_014750__    251 GGAACCGTTTTTTAGAAATCACCTGGACCGTTATTCCGATCCTGCTTCTG    300

BSNT_02475___    301 ATTATTCTTGTGATTCCTGTTGTATTATATACGCTAGAGCTAGCGGACAC    350
                     |||||||||||.|||||.|||||..|..||||..|.|.|||.|||||.||
RBAM_014750__    301 ATTATTCTTGTCATTCCGGTTGTCATCGATACATTGGCGCTGGCGGATAC    350

BSNT_02475___    351 ATCACCAATGGATAAAAAAGGCCGCAAAGCTGAGGATGCTCTTGTAGTCA    400
                     .||.||.||||||||.|||..|||.|||||.||||||||.||.||..|.|
RBAM_014750__    351 GTCGCCGATGGATAAGAAAAACCGTAAAGCAGAGGATGCGCTCGTGATTA    400

BSNT_02475___    401 ATGTTAGGGCAAATTTATACTGGTGGGAGTTTGAGTACCCTGATTACGAC    450
                     ||||.|||||.|||||||||||||||||.||.|||||.||||||||||..
RBAM_014750__    401 ATGTAAGGGCGAATTTATACTGGTGGGAATTCGAGTATCCTGATTACGGG    450

BSNT_02475___    451 ATTATCACAAGCCAGGAGCTGATTGTACCGACAGATCAGCGTGTATATTT    500
                     .||.|.|||||.|||||||||||.||.||.||||||.|.||.||.|||||
RBAM_014750__    451 TTTGTGACAAGTCAGGAGCTGATCGTTCCCACAGATGAACGCGTCTATTT    500

BSNT_02475___    501 TAATTTAAAAGCCTCTGATGTAAAACATTCCTTCTGGATTCCTTCAGTTG    550
                     .||..|.||..||||.|||||.|||||.||.|||||||||||.||||..|
RBAM_014750__    501 CAAGCTGAAGTCCTCAGATGTGAAACACTCTTTCTGGATTCCGTCAGCCG    550

BSNT_02475___    551 GAGGAAAACTTGATACGAATACGGATAATGAAAATAAGTTCTTCCTGACA    600
                     |.||||||.|.|||||.||||||||||||||.||||..|||||.|||||.
RBAM_014750__    551 GGGGAAAAATCGATACAAATACGGATAATGACAATACTTTCTTTCTGACC    600

BSNT_02475___    601 TTTGATTCAAAACGAAGCAAAGAGGCAGGAG-ATATGTTTTTTGGGAAGT    649
                     ||.|||||.|||||.||||||||.||.|||| |||| ||.||.|||||.|
RBAM_014750__    601 TTCGATTCTAAACGCAGCAAAGAAGCGGGAGAATAT-TTCTTCGGGAAAT    649

BSNT_02475___    650 GTGCAGAGCTTTGCGGCCCTTCACATGCGCTGATGGATTTTAAGGTGAAG    699
                     |.||||||||.|||||.|||||||||||||||||||||||.||.|||||.
RBAM_014750__    650 GCGCAGAGCTGTGCGGACCTTCACATGCGCTGATGGATTTCAAAGTGAAA    699

BSNT_02475___    700 ACGATGTCTGCAAAAGAATTTCAGGGCTGGACAAAAGAAATGAAAAACTA    749
                     .||.||.|..|||||||||||.|....|||||.||||..||||||||.||
RBAM_014750__    700 CCGCTGCCGTCAAAAGAATTTAAACAATGGACGAAAGCGATGAAAAATTA    749

BSNT_02475___    750 TAAATCTACAGCAGAGAGCGATTTGGCTAAGCAGGGTGAAGAACTGTTTA    799
                     |||...||||.||||...||.|||.||...|||.||.|||||.|||||||
RBAM_014750__    750 TAAGCATACAACAGACTCCGGTTTAGCCGCGCAAGGAGAAGAGCTGTTTA    799

BSNT_02475___    800 AAGAGAAAAACTGCCTGAGCTGCCATGCGGTAGAGCCGAATGATAAGCGT    849
                     |.||.|||||||||||||||||.||||||||.|||||.||||||||.||.
RBAM_014750__    800 AGGAAAAAAACTGCCTGAGCTGTCATGCGGTTGAGCCCAATGATAAACGG    849

BSNT_02475___    850 GCAGAAGCCGCTAGAACGGCACCTAACTTGGCGACCTTCGGTGAAAGGAC    899
                     ||.|||||.||.||||||||.||.|||.|.||.||||||||||||.||..
RBAM_014750__    850 GCTGAAGCGGCAAGAACGGCTCCGAACCTCGCTACCTTCGGTGAACGGGT    899

BSNT_02475___    900 AAAAGTGGCAGGGGTGAAAGAGGCCAACAAAGAAAATGTGAAGGCTTGGC    949
                     .||||||||.||..|.||.||.||.||.|||||.|||.|.||.||.||||
RBAM_014750__    900 CAAAGTGGCCGGCATTAAGGATGCGAATAAAGAGAATATAAAAGCCTGGC    949

BSNT_02475___    950 TAAAGGACCCTGACAGCATAAAGCCGGGGAACAAAATGACAGGCACATAT    999
                     |.||..|.||.||||||||.||.|||||.||.||||||||||||||.|||
RBAM_014750__    950 TGAAAAATCCGGACAGCATTAAACCGGGCAATAAAATGACAGGCACTTAT    999

BSNT_02475___   1000 CCAAAGCTCTCAGACAGC-GAAACAGATGCGCTTTATGAATACTTAAAAG   1048
                     ||.||||||||.||| || |||||.||||||||.||||||||.|||||||
RBAM_014750__   1000 CCGAAGCTCTCGGAC-GCTGAAACGGATGCGCTGTATGAATATTTAAAAG   1048

BSNT_02475___   1049 GCTTAAAAGCGGAAAGCAAGTAG-   1071
                     |..|.||||||||.|.||||| | 
RBAM_014750__   1049 GGCTGAAAGCGGAGAACAAGT-GA   1071


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