Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02476 and RBAM_014760

See Amino acid alignment / Visit BSNT_02476 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:14
# Commandline: needle
#    -asequence dna-align/BSNT_02476___ctaD.1.9828.seq
#    -bsequence dna-align/RBAM_014760___ctaD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02476___ctaD-RBAM_014760___ctaD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02476___ctaD-RBAM_014760___ctaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02476___ctaD
# 2: RBAM_014760___ctaD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1894
# Identity:    1500/1894 (79.2%)
# Similarity:  1500/1894 (79.2%)
# Gaps:          50/1894 ( 2.6%)
# Score: 5975.5
# 
#
#=======================================

BSNT_02476___      1 ATGTTGAATGCGCTTACAG-----------AAAAGCGGACGCGCGGATCT     39
                     |||.|||||.|||||||||           ||||||           |||
RBAM_014760__      1 ATGATGAATACGCTTACAGGACAGCAAAGAAAAAGC-----------TCT     39

BSNT_02476___     40 ATGCTTTGGGATTATTTGACGACGGTGGACCATAAAAAAATCGCGATTCT     89
                     .|||||||||||||||||||||||||.||||||||.||||||||||||.|
RBAM_014760__     40 TTGCTTTGGGATTATTTGACGACGGTTGACCATAAGAAAATCGCGATTTT     89

BSNT_02476___     90 TTATTTAGTGGCAGGGGGATTCTTCTTTCTTGTCGGGGGAATTGAAGCGA    139
                     .|||.|..|.||.||||||||.|||||..|.|||||.|||.||||.||.|
RBAM_014760__     90 ATATATGATCGCCGGGGGATTTTTCTTCGTCGTCGGCGGACTTGAGGCCA    139

BSNT_02476___    140 TGTTTATCAGAATTCAG--CTTGCAAAGCCGGAAAATGCGTTTCTCAGTG    187
                     ||.|||||||.||||||  ||||  |.|||||..||.|..|||.|..|||
RBAM_014760__    140 TGCTTATCAGGATTCAGCTCTTG--AGGCCGGGGAACGATTTTATGGGTG    187

BSNT_02476___    188 CTCAAGCA-TATAATGAAGTAATGACTATGCACGGAACGACGATGATCTT    236
                     ||| |||| |.|||||||.|.|||||.||||||||.|||||.||||||||
RBAM_014760__    188 CTC-AGCAGTTTAATGAAATTATGACGATGCACGGCACGACAATGATCTT    236

BSNT_02476___    237 TCTGGCTGCGATGCCGCTCTTATTTGCCTTGATGAATGCGGTTGTGCCTT    286
                     .|||||.|||||||||||.|||||.|...|||||||.|||||||||||..
RBAM_014760__    237 CCTGGCGGCGATGCCGCTGTTATTCGGGCTGATGAACGCGGTTGTGCCGC    286

BSNT_02476___    287 TGCAGATCGGGGCTCGGGACGTTTCGTTTCCATTTTTAAACGCGCTTGGT    336
                     |.|||||||||||.||.|||||.|||||.||||||.|.||.|||||.||.
RBAM_014760__    287 TTCAGATCGGGGCGCGTGACGTATCGTTCCCATTTCTGAATGCGCTCGGA    336

BSNT_02476___    337 TTTTGGCTCTTCTTTTTCGGGGGCATTTTCTTAAATCTAAGCTGGTTTTT    386
                     ||||||||.||.||.|||||.|||||.||.||.|||||.|||||||||||
RBAM_014760__    337 TTTTGGCTGTTTTTCTTCGGAGGCATCTTTTTGAATCTGAGCTGGTTTTT    386

BSNT_02476___    387 GGGCGGAGCGCCAGATGCGGGCTGGACGTCATATGCCTCACTTTCGCTTC    436
                     .||.||.||.||.|||||.|||||||||||.||.||.||.|||.||||..
RBAM_014760__    387 AGGAGGCGCTCCTGATGCAGGCTGGACGTCGTACGCGTCGCTTGCGCTGA    436

BSNT_02476___    437 ATTCTAAAGGGCACGGCATAGACTTTTTCGTCCTCGGACTCCAAATATCG    486
                     ||||.||||||||||||||||||||||||||.|||||.||.||||||||.
RBAM_014760__    437 ATTCGAAAGGGCACGGCATAGACTTTTTCGTGCTCGGCCTGCAAATATCA    486

BSNT_02476___    487 GGGCTCGGGACGCTGATAGCCGGGATTAACTTTTTGGCCACGATTATCAA    536
                     ||..|.||.||||||||.||.|||||.||||||.|.|||||||||||.||
RBAM_014760__    487 GGCTTAGGTACGCTGATTGCGGGGATCAACTTTCTCGCCACGATTATTAA    536

BSNT_02476___    537 CATGAGGGCTCCGGGCATGACGTATATGAGGCTGCCTTTGTTTACATGGA    586
                     .||||||||.|||||..|||||||||||||.|||||..|||||||.||||
RBAM_014760__    537 TATGAGGGCGCCGGGTTTGACGTATATGAGACTGCCGCTGTTTACGTGGA    586

BSNT_02476___    587 CGACATTTGTGGCCTCGGCATTGATTTTGTTCGCGTTTCCGCCGCTTACG    636
                     |||||||||||||.||||||.|.|||||.|||||.|||||.|||||.||.
RBAM_014760__    587 CGACATTTGTGGCGTCGGCACTCATTTTATTCGCATTTCCTCCGCTCACC    636

BSNT_02476___    637 GTTGGATTGGCACTGATGATGCTGGATCGGCTGTTCGGCACCAATTTCTT    686
                     ||.||.|||||.|||||||||||||||||..|||||||.||.||||||||
RBAM_014760__    637 GTCGGTTTGGCGCTGATGATGCTGGATCGTTTGTTCGGAACGAATTTCTT    686

BSNT_02476___    687 TAATCCGGAGCTTGGCGGGAATACGGTCATTTGGGAGCATTTATTTTGGA    736
                     ||||||.||..|.|||||.||||||.|.||.|||||||||.|.|||||||
RBAM_014760__    687 TAATCCTGAATTGGGCGGCAATACGATAATCTGGGAGCATCTGTTTTGGA    736

BSNT_02476___    737 TCTTTGGCCATCCGGAGGTTTATATCTTAATTTTGCCTGCATTCGGTATT    786
                     |.||.||.||||||||.||.||.||.||||||.|.||.||.||.||.|||
RBAM_014760__    737 TTTTCGGGCATCCGGAAGTATACATTTTAATTCTTCCCGCCTTTGGGATT    786

BSNT_02476___    787 TTTTCAGAGGTCATCCCTGTGTTTGCCAGAAAGCGTTTGTTTGGGTACTC    836
                     ||||||||..||||.||.||.|||||.||.||.|||.||||.||.||.||
RBAM_014760__    787 TTTTCAGAAATCATTCCCGTATTTGCGAGGAAACGTCTGTTCGGTTATTC    836

BSNT_02476___    837 ATCAATGGTTTTTGCCATCGTGCTCATCGGCTTTTTGGGCTTTATGGTTT    886
                     .||.|||||.|||||.||||||||.|||||||||.|.||.||.|||||||
RBAM_014760__    837 GTCTATGGTCTTTGCGATCGTGCTGATCGGCTTTCTCGGGTTCATGGTTT    886

BSNT_02476___    887 GGGTGCATCACATGTTTACGACAGGTCTCGGCCCAATTGCAAATGCGATT    936
                     ||||.||.||.|||||||||||.||.|||||.||.||.||.||||||||.
RBAM_014760__    887 GGGTTCACCATATGTTTACGACGGGACTCGGACCGATCGCTAATGCGATA    936

BSNT_02476___    937 TTTGCGGTTGCAACAATGGCTATCGCGATTCCGACCGGGATTAAGATTTT    986
                     |||||||||||.||.|||||.||||||.|.||.||.||.|||||.|||||
RBAM_014760__    937 TTTGCGGTTGCGACGATGGCGATCGCGGTGCCTACGGGCATTAAAATTTT    986

BSNT_02476___    987 TAACTGGCTGTTGACGATTTGGGGAGGAAATGTGAAGTATACAACCGCTA   1036
                     .||||||||.|||||.||.||||||||||||||.||.|..||.||..|||
RBAM_014760__    987 CAACTGGCTTTTGACCATCTGGGGAGGAAATGTCAAATTCACGACGCCTA   1036

BSNT_02476___   1037 TGCTGTATGCTGTCTCATTTATTCCATCCTTTGTGCTCGGCGGTGTGACG   1086
                     ||||||||||.|||.|.||||||||.||.||.||.|||||.||.||.|||
RBAM_014760__   1037 TGCTGTATGCCGTCGCCTTTATTCCTTCTTTCGTACTCGGAGGAGTCACG   1086

BSNT_02476___   1087 GGAGTCATGCTGGCAGCTGCTGCGGCTGATTATCAGTTTCATGATACGTA   1136
                     ||.|||||||||||.||.||.|||||.|||||||||||.||.||||||||
RBAM_014760__   1087 GGTGTCATGCTGGCGGCCGCAGCGGCAGATTATCAGTTCCACGATACGTA   1136

BSNT_02476___   1137 TTTTGTGGTTGCACACTTCCACTACGTCATTATTGGCGGTGTTGTATTCG   1186
                     ||||||.||.||.||.||||||||.||||||||.|||||.|||||.||||
RBAM_014760__   1137 TTTTGTCGTAGCGCATTTCCACTATGTCATTATCGGCGGCGTTGTGTTCG   1186

BSNT_02476___   1187 GCCTTTTAGCCGGTGTTCATTTCTGGTGGCCGAAAATGTTCGGTAAAATT   1236
                     ||.|..|.||.||.||.||||||||||||||||||||||||||.||..|.
RBAM_014760__   1187 GCATCCTGGCGGGGGTGCATTTCTGGTGGCCGAAAATGTTCGGGAAGGTG   1236

BSNT_02476___   1237 CTGCATGAAACGATGGGGAAAATTTCATTTGTATTGTTTTTTATCGGCTT   1286
                     ||.|||||||||||||||||||||||.||.||.||.|||||||||||.||
RBAM_014760__   1237 CTTCATGAAACGATGGGGAAAATTTCGTTCGTCTTATTTTTTATCGGGTT   1286

BSNT_02476___   1287 TCACCTCACGTTTTTCATTCAGCATTTTGTCGGCTTAATGGGGATGCCGC   1336
                     |||.||.||.||.||||||||||||||..||||.||.|||||.|||||||
RBAM_014760__   1287 TCATCTTACCTTCTTCATTCAGCATTTCCTCGGTTTGATGGGAATGCCGC   1336

BSNT_02476___   1337 GCCGGGTTTATACGTTTTTGCCAGGACAGGGTCTGGAAACCGGCAACTTG   1386
                     |.||.|||||.||.|.|.||||.||.|||||.||.||.|||||||||.||
RBAM_014760__   1337 GGCGCGTTTACACATATCTGCCCGGCCAGGGGCTTGATACCGGCAACCTG   1386

BSNT_02476___   1387 ATCAGTACAATTGGGGCGTTTTTTATGGCG---GCAGCTG--TTATTCTT   1431
                     ||||||.||||.||.||||||||.||||||   ||.||||  |||.||.|
RBAM_014760__   1387 ATCAGTTCAATCGGCGCGTTTTTCATGGCGGGCGCGGCTGCTTTACTCGT   1436

BSNT_02476___   1432 CTGCTGGTCAATGTCATATGGACATCGGTAAAAGGTGAATATGTAGGTGC   1481
                     |     ||||||.|.||.|..||.||..||||.||..||||.||.||...
RBAM_014760__   1437 C-----GTCAATATTATTTATACCTCAATAAAGGGGAAATACGTCGGGAA   1481

BSNT_02476___   1482 TGATCCATGGCATGACGGACGTACGCTGGAATGGACCGTTTCTTCACCGC   1531
                     .||.||.||||..|||||.||||||||.||||||.|.||||||||.||||
RBAM_014760__   1482 CGACCCGTGGCTGGACGGTCGTACGCTTGAATGGGCGGTTTCTTCGCCGC   1531

BSNT_02476___   1532 CGCCGGAGTATAACTTTAAACAGCTTCCTTTTGTCAGAGGACTTGATCCG   1581
                     |||||||.|||||.||||||||||||||.||||||.|.||||||||.|||
RBAM_014760__   1532 CGCCGGAATATAATTTTAAACAGCTTCCGTTTGTCCGGGGACTTGACCCG   1581

BSNT_02476___   1582 CTTTGGATCGAGAAGCAGGCAGGACACAAATCA----ATGACGCCGGCGG   1627
                     ||.|||||.||.||||||||.||    ||||.|    |||.||||.||.|
RBAM_014760__   1582 CTGTGGATTGAAAAGCAGGCCGG----AAATGAAGGGATGGCGCCTGCAG   1627

BSNT_02476___   1628 AACCGGTTGATGATATTCATATGCCAAACGGCTCAATCCTGCCGCTCATC   1677
                     |.||.||.||.||.|||||||||||.|||||.||.|||.|||||.|.|||
RBAM_014760__   1628 AGCCTGTAGAGGACATTCATATGCCGAACGGATCCATCATGCCGTTTATC   1677

BSNT_02476___   1678 ATTTCCTTCGGCCTTTTTGTCGCAGCGTTCGGGCTGCTGTACAGAAGT--   1725
                     ||.||.|||||.||.||||||||||||||||||.|  |.||.|..|.|  
RBAM_014760__   1678 ATATCTTTCGGGCTGTTTGTCGCAGCGTTCGGGTT--TTTATACCACTCC   1725

BSNT_02476___   1726 GATTACGCTTGGGGCCTGCCAGTGATCTTTATCGGGCTCGGCATCACATT   1775
                     |||||..|.|||||.||.||.||.|||||.||.|||||||||||||||||
RBAM_014760__   1726 GATTATTCATGGGGGCTTCCGGTTATCTTCATAGGGCTCGGCATCACATT   1775

BSNT_02476___   1776 TATTACGATGCTGCTTCGTTCAGTAATTGATGATCACGGCTATCATATTC   1825
                     ..||||.|||||||||||.||.||..|.||||||.|||||||||||||||
RBAM_014760__   1776 CTTTACCATGCTGCTTCGCTCTGTGGTCGATGATTACGGCTATCATATTC   1825

BSNT_02476___   1826 ATAAAGAGGAACTGCCGAACGATGATAAAGGGGTGAAGGCATAA   1869
                     |.|||||.||.||||||||.||||||||||||||||||||.|||
RBAM_014760__   1826 ACAAAGAAGATCTGCCGAATGATGATAAAGGGGTGAAGGCGTAA   1869


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