Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02489 and RBAM_014860

See Amino acid alignment / Visit BSNT_02489 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:15
# Commandline: needle
#    -asequence dna-align/BSNT_02489.1.9828.seq
#    -bsequence dna-align/RBAM_014860___ylbG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02489-RBAM_014860___ylbG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02489-RBAM_014860___ylbG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02489
# 2: RBAM_014860___ylbG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity:     177/273 (64.8%)
# Similarity:   177/273 (64.8%)
# Gaps:          57/273 (20.9%)
# Score: 729.0
# 
#
#=======================================

BSNT_02489         0 --------------------------------------------------      0
                                                                       
RBAM_014860__      1 ATGGAAAATAAGCGCCAAGGCATAATCGTATATCTGCATTCCTTAAAACA     50

BSNT_02489         1 -------ATGCTGAGGAAGTTCGGGAATGTGCACTATGTATCAAAACGAT     43
                            ||||||||.||.|||||.||.||.||.|||||.||.||.||..
RBAM_014860__     51 CAGCAAAATGCTGAGAAAATTCGGCAACGTTCATTATGTTTCCAAGCGGC    100

BSNT_02489        44 TAAAATATGTCGTACTGTACTGTGATATGGACCAAATTGAAAAAACAATG     93
                     |.|||||.||.||.|||||.||.||||||||||.|||.||||||||||||
RBAM_014860__    101 TGAAATACGTTGTGCTGTATTGCGATATGGACCTAATCGAAAAAACAATG    150

BSNT_02489        94 GACAAGATTGCGTCTTACTCATTTGTGAAAAAAGTGGAGCCTTCTTATAA    143
                     ||.||||||.|.|||||.||.|.||||||.||.||.||||||||||||||
RBAM_014860__    151 GAAAAGATTTCTTCTTATTCTTATGTGAAGAAGGTAGAGCCTTCTTATAA    200

BSNT_02489       144 ACCGTTTTTAAAATTGGAATTCGAGTCAAAGCTTGATAAGGCAAAAGAAT    193
                     |||.||||||||..|||||||.||.|||||||||||||||||.|||||.|
RBAM_014860__    201 ACCTTTTTTAAAGCTGGAATTTGAATCAAAGCTTGATAAGGCGAAAGAGT    250

BSNT_02489       194 ACGATTATAAAATCGGCATATAG    216
                     |||||||.|||.||||.|||||.
RBAM_014860__    251 ACGATTACAAAGTCGGTATATAA    273


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