Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02491 and RBAM_014870

See Amino acid alignment / Visit BSNT_02491 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:15
# Commandline: needle
#    -asequence dna-align/BSNT_02491___ylbH.1.9828.seq
#    -bsequence dna-align/RBAM_014870___ylbH.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02491___ylbH-RBAM_014870___ylbH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02491___ylbH-RBAM_014870___ylbH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02491___ylbH
# 2: RBAM_014870___ylbH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 565
# Identity:     341/565 (60.4%)
# Similarity:   341/565 (60.4%)
# Gaps:         122/565 (21.6%)
# Score: 1230.0
# 
#
#=======================================

BSNT_02491___      0 --------------------------------------------------      0
                                                                       
RBAM_014870__      1 ATGAGAGTAATTTCCGGTTCAAGAAAAGGACGAGCCTTAAAGGCTGTGCC     50

BSNT_02491___      0 --------------------------------------------------      0
                                                                       
RBAM_014870__     51 GGGCACATCAACAAGGCCGACGACGGATAAAGTAAAAGAGTCTATTTTTA    100

BSNT_02491___      1 --ATGATCGGCCCTTATTTTGACGGGGGCATGGGACTTGACTTATTCGCA     48
                       |||||||||||.|||||||||||.||.|.|||.|||||.||.||.||.
RBAM_014870__    101 ATATGATCGGCCCGTATTTTGACGGAGGAACGGGGCTTGATTTGTTTGCG    150

BSNT_02491___     49 GGGAGCGGAGGACTTGGAATCGAAGCGCTTTCACGCGGGTTTGAGCATTG     98
                     ||||||||.||.||.||.||.||||||||.||.|||||.|||||.|..||
RBAM_014870__    151 GGGAGCGGCGGTCTCGGGATTGAAGCGCTGTCGCGCGGATTTGACCGCTG    200

BSNT_02491___     99 TATATTCGTTGACCGTGATTTTAAAGCGATTCAAACGGTAAAATCTAATT    148
                     |||.||.||.||.||||||||.|||||.||.||||||||||||.|.|||.
RBAM_014870__    201 TATCTTTGTGGATCGTGATTTCAAAGCCATCCAAACGGTAAAAGCGAATA    250

BSNT_02491___    149 TGAAAACGCTGGAGCT------TACAAAACATGCACAGGTATACCGCAAT    192
                     |.|||.||||.||.||      |.||      ||..|.||||||||||||
RBAM_014870__    251 TCAAAGCGCTTGATCTGCTGTCTTCA------GCGGAAGTATACCGCAAT    294

BSNT_02491___    193 GATGCGGAACGAGCTTTGCACGCTGCTGCTAAAAGAGAAACCGGCTTTCG    242
                     |||||.||.||.||..|..|.||.||.||.|||.|.||||..||.|||..
RBAM_014870__    295 GATGCAGAGCGGGCCCTCTATGCCGCGGCGAAACGGGAAAAAGGTTTTGA    344

BSNT_02491___    243 CGGAATTTTTCTCGATCCGCCGTATAAGGAACAAAAGCTGAAAGCACTTT    292
                     |||||||||..|.|||||.||||||||||||||||||||||||||.|||.
RBAM_014870__    345 CGGAATTTTCTTAGATCCTCCGTATAAGGAACAAAAGCTGAAAGCGCTTA    394

BSNT_02491___    293 T---AACGCTGATTGACGAATATCAAATGCTGGAAGAAGACGGCTTTATC    339
                     |   ||   |||||||.|||.|..|.||||||.|.||||||||.|||.||
RBAM_014870__    395 TCGAAA---TGATTGATGAACAGAACATGCTGAATGAAGACGGTTTTGTC    441

BSNT_02491___    340 GTCGCTGAGCATGACAGAGAGGTCGAGCTTCCCGAAACCGTAGGAGATC-    388
                     ||.||.||||||||.|.||..||.|.||||||.|||.||||.||.|..| 
RBAM_014870__    442 GTAGCCGAGCATGATAAAGCCGTTGCGCTTCCTGAAGCCGTCGGCGCGCT    491

BSNT_02491___    389 TTGTGATGACAAGAAAAGAAACCTATGGGTTAACAGGTGTGGCGATTTAT    438
                     ||.|| |.|||||||..||||..||.|||.|.|||||.|||.||||.||.
RBAM_014870__    492 TTCTG-TAACAAGAAGGGAAATTTACGGGCTTACAGGAGTGACGATATAC    540

BSNT_02491___    439 AAAAAGAGGGGGTAG    453
                     ..|||.||||||||.
RBAM_014870__    541 CGAAATAGGGGGTAA    555


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