Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02498 and RBAM_014930

See Amino acid alignment / Visit BSNT_02498 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:15
# Commandline: needle
#    -asequence dna-align/BSNT_02498___ylbN.1.9828.seq
#    -bsequence dna-align/RBAM_014930___ylbN.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02498___ylbN-RBAM_014930___ylbN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02498___ylbN-RBAM_014930___ylbN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02498___ylbN
# 2: RBAM_014930___ylbN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 520
# Identity:     453/520 (87.1%)
# Similarity:   453/520 (87.1%)
# Gaps:           2/520 ( 0.4%)
# Score: 1985.0
# 
#
#=======================================

BSNT_02498___      1 ATGAAATGGACGATTTATCAGCTGCATCAAAT-GCCAAAACAAAGTTTTG     49
                     |||||||||||||||||||||||.|||||||| ||.|||| |.||.||||
RBAM_014930__      1 ATGAAATGGACGATTTATCAGCTTCATCAAATCGCGAAAA-AGAGCTTTG     49

BSNT_02498___     50 AGTTTGATGAAACAGTTGAGTTAAATGAGCTGACAAAGCTGAATTCTGAC     99
                     |.|||||||||||||||||||||||||||||||||||..|||||||||||
RBAM_014930__     50 AATTTGATGAAACAGTTGAGTTAAATGAGCTGACAAAATTGAATTCTGAC     99

BSNT_02498___    100 ATTCGCCGCATTTCTCCCGTCCGGGTGAAGGGCAGAGCGGATATCAAATC    149
                     ||.||||||||||||||||||||||||||||||.|.|||||.||..||||
RBAM_014930__    100 ATCCGCCGCATTTCTCCCGTCCGGGTGAAGGGCCGCGCGGAGATTGAATC    149

BSNT_02498___    150 CAAACAGGTTTCGTTTGATTTTACAATTTCAGGCGAAATGATTTTGCCAT    199
                     |||.||.|||||||||||.|||||.|||||||||||||||.|||||||.|
RBAM_014930__    150 CAAGCAAGTTTCGTTTGACTTTACGATTTCAGGCGAAATGGTTTTGCCGT    199

BSNT_02498___    200 GCTCAAGAACACTCGTTGATGTCCCGTATCCATTTGAAATTTCAACAAAA    249
                     ||||||||||..|.||||||||.||||||||||||..|||..|.||||||
RBAM_014930__    200 GCTCAAGAACTTTAGTTGATGTGCCGTATCCATTTACAATCGCGACAAAA    249

BSNT_02498___    250 GAACTGTTTATATTTCATCACACGGATGATATAGAAGATGATGACGTTCA    299
                     ||||||||||.|||||||.|..|||||||||||||||||||.||||||||
RBAM_014930__    250 GAACTGTTTAGATTTCATAAGTCGGATGATATAGAAGATGAGGACGTTCA    299

BSNT_02498___    300 TATTGTTGAGGACGATACTATCGACTTAACTCCGATCGTGAAAGAAGAAA    349
                     |.|||.|||.||||||||..|||||||||||||||||.|.||||||||.|
RBAM_014930__    300 TTTTGCTGAAGACGATACCGTCGACTTAACTCCGATCATAAAAGAAGAGA    349

BSNT_02498___    350 TTCTTTTAGAAATCCCTATGCAAATCTTTTGTGAATCTGAACAAGAAAAA    399
                     |||||||||||||.|||||||||.|||||||||||.||||||||.||.||
RBAM_014930__    350 TTCTTTTAGAAATTCCTATGCAAGTCTTTTGTGAAACTGAACAAAAAGAA    399

BSNT_02498___    400 GGAGCTGCTCCTCAAGAAGGAAAGGATTGGCAAGTCATTTCGGAAGAAGA    449
                     |||||.|||||.||||..||.||||||||||||||.|||||.||.|||||
RBAM_014930__    400 GGAGCCGCTCCCCAAGTGGGGAAGGATTGGCAAGTGATTTCTGAGGAAGA    449

BSNT_02498___    450 CAAGAAGAATCAAGTTGATCCGAGACTTGCAGCCCTTGAAAAGCTCTTAA    499
                     ||||||.||||||.|.||.||.||||||||.|..||..||||||||||||
RBAM_014930__    450 CAAGAAAAATCAAATCGACCCCAGACTTGCGGATCTGAAAAAGCTCTTAA    499

BSNT_02498___    500 AACAAGATGATGAATCTTAA    519
                     .|||||||||||||||||||
RBAM_014930__    500 CACAAGATGATGAATCTTAA    519


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