Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02501 and RBAM_014960

See Amino acid alignment / Visit BSNT_02501 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:16
# Commandline: needle
#    -asequence dna-align/BSNT_02501___ylbP.1.9828.seq
#    -bsequence dna-align/RBAM_014960___ylbP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02501___ylbP-RBAM_014960___ylbP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02501___ylbP-RBAM_014960___ylbP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02501___ylbP
# 2: RBAM_014960___ylbP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 490
# Identity:     390/490 (79.6%)
# Similarity:   390/490 (79.6%)
# Gaps:          14/490 ( 2.9%)
# Score: 1553.0
# 
#
#=======================================

BSNT_02501___      1 ---TTGACAAAGGTAGAACGTCTGCTTATCAACTATAAAACGCTGGAAGA     47
                        ||||.||   ||||.||.|||||.|||||||.|||.||.||.|||||
RBAM_014960__      1 GTGTTGAAAA---TAGAGCGACTGCTCATCAACTTTAAGACACTCGAAGA     47

BSNT_02501___     48 ATTCAAGAAATTCAAAGAATACGGCATTCAGGAGCTTTCAATGCTTGAAG     97
                     |||.||.|..||.||.||||||||.||.||||||||.||.||||||||||
RBAM_014960__     48 ATTTAAAAGGTTTAAGGAATACGGGATGCAGGAGCTGTCGATGCTTGAAG     97

BSNT_02501___     98 AACTTCAGGATAATATTATTGAAAATGACAGCACCTCGCCTTTTTACGGG    147
                     |.||||||||||||||.|||||||||||||||||||||||||||||||||
RBAM_014960__     98 ATCTTCAGGATAATATCATTGAAAATGACAGCACCTCGCCTTTTTACGGG    147

BSNT_02501___    148 ATTTATTTTGGCGATAAACTTGTAGCACGAATGAGCCTGTATCAAGTTAA    197
                     |||||.||.||.||||||||.||.||..|||||||..|.|||||.||.||
RBAM_014960__    148 ATTTACTTCGGGGATAAACTAGTGGCGAGAATGAGTTTATATCAGGTAAA    197

BSNT_02501___    198 C---GGCAAATCGAATCCCTATTTTGACAACCGCCAGGATTATTTGGAGC    244
                     |   ||||   |||||||.||||||||..|.||.|||||.|.||||||.|
RBAM_014960__    198 CGGAGGCA---CGAATCCGTATTTTGATCAGCGTCAGGACTTTTTGGAAC    244

BSNT_02501___    245 TGTGGAAGCTTGAGGTTCTTCCGGGCTACCAGAACAGGGGATACGGGAGA    294
                     |.||||||||||||||||||||||||||.||.||||..||||||||.|.|
RBAM_014960__    245 TTTGGAAGCTTGAGGTTCTTCCGGGCTATCAAAACAACGGATACGGAAAA    294

BSNT_02501___    295 GC-CTTGGTTGAATTTGCAAAATCATTCAAAATGCCGATCCGGACAAATC    343
                     || ||| |||||.|||||||||||.||||.||||||||||.||||||||.
RBAM_014960__    295 GCGCTT-GTTGATTTTGCAAAATCCTTCAGAATGCCGATCAGGACAAATT    343

BSNT_02501___    344 CGAGAATGAAATCAGCGGAATTTTGGAACAAAATGAACTTTAAAACTGTT    393
                     |..|.|||||||||||.||.||.|||.|.||.|||||.|||.|..|.|||
RBAM_014960__    344 CACGCATGAAATCAGCAGATTTCTGGGATAAGATGAATTTTGAGCCCGTT    393

BSNT_02501___    394 AAGTATGATATGGCGCGGGACAAAGGGGAAAACCCGCTCATCTGGCATCC    443
                     ||.||||||||||||||.||.|||||.|||||.||....|||||||||||
RBAM_014960__    394 AAATATGATATGGCGCGTGATAAAGGAGAAAATCCTTATATCTGGCATCC    443

BSNT_02501___    444 TGATATGGATCACGAAATGACACCGGGAGAGTCTGCATAG    483
                     .||||||||....|||||||||.|.|||||..|.|||||.
RBAM_014960__    444 CGATATGGACGGTGAAATGACATCCGGAGAAACGGCATAA    483


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