Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02509 and RBAM_015030
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:17
# Commandline: needle
# -asequence dna-align/BSNT_02509___spoVD.1.9828.seq
# -bsequence dna-align/RBAM_015030___spoVD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02509___spoVD-RBAM_015030___spoVD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02509___spoVD-RBAM_015030___spoVD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02509___spoVD
# 2: RBAM_015030___spoVD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1944
# Identity: 1556/1944 (80.0%)
# Similarity: 1556/1944 (80.0%)
# Gaps: 27/1944 ( 1.4%)
# Score: 6284.5
#
#
#=======================================
BSNT_02509___ 1 TTGCGCGTCTCGAATGTAACGGTTAGAAAACGTTTATTATTTGTTTTGCT 50
||||||||.||.||||||||||||.||||||||||||||.|.||||||||
RBAM_015030__ 1 TTGCGCGTTTCAAATGTAACGGTTCGAAAACGTTTATTACTGGTTTTGCT 50
BSNT_02509___ 51 TTTTGGCGTGATCGTGTTTCTGATCATTGATACAAGGCTGGGGTATGTTC 100
|||||||||.|||.|.|||.||||||||||.|..||..|.||.|||||.|
RBAM_015030__ 51 TTTTGGCGTAATCATTTTTTTGATCATTGACAGCAGATTAGGCTATGTCC 100
BSNT_02509___ 101 AGTTTGTGATGGGCGAAAAACTGACTTCGCTAGCGAAAGATTCCTGGAGC 150
|.|||||||||||.|||||.||||||||.||.||.||.||||||||||||
RBAM_015030__ 101 AATTTGTGATGGGAGAAAAGCTGACTTCACTGGCTAAGGATTCCTGGAGC 150
BSNT_02509___ 151 CGGAACTTGCCGTTTGAGCCGGAGAGAGGCGAGATTCTGGATCGGAATGG 200
|||||.||||||||||||||.|||.|.||.|||||.||.||.||.||.||
RBAM_015030__ 151 CGGAATTTGCCGTTTGAGCCTGAGCGGGGAGAGATCCTTGACCGAAACGG 200
BSNT_02509___ 201 TGTGAAGCTCGCAACAAATAAAAGTGCGCCGACCGTATTCGTCGTGCCGC 250
.||||||||.|||||.||||||||.|||||||||||.||.|||||.||||
RBAM_015030__ 201 CGTGAAGCTGGCAACTAATAAAAGCGCGCCGACCGTCTTTGTCGTACCGC 250
BSNT_02509___ 251 GCCAAGTTCAGAATCCGATGAAAACGAGCAAGCAGCTTGCGGCGGTGCTC 300
||||..|.||.|||||.||.||||||.||||.|..||.|||.|.||..|.
RBAM_015030__ 251 GCCAGATCCAAAATCCCATAAAAACGGGCAAACTTCTCGCGTCAGTTTTA 300
BSNT_02509___ 301 AATATGTCAGAAGAAAAAGTATATAAACATGTGACTAAAAAAGCGTCAAT 350
||||||||.|||||.||.||.||.|||||..|.|||||.|||.|.||.||
RBAM_015030__ 301 AATATGTCGGAAGAGAAGGTCTACAAACACATTACTAAGAAAACCTCCAT 350
BSNT_02509___ 351 CGAAAAGATCACTCCTGAAGGGAGAAAAATTTCAAATGAGAAGGCGAAGG 400
.|||||.|||.|.||.||.|||.|.||||||||.|||.|.||.|||||.|
RBAM_015030__ 351 AGAAAAAATCTCACCCGAGGGGCGGAAAATTTCCAATAAAAAAGCGAAAG 400
BSNT_02509___ 401 AAATTAAAGCGCTTGATTTAAAAGGTGTGTATGTTGCGGAGGACAGTATC 450
||||.||||||||.||.||||||||.||||||||.||.||.|||||.|||
RBAM_015030__ 401 AAATCAAAGCGCTCGACTTAAAAGGGGTGTATGTGGCTGAAGACAGCATC 450
BSNT_02509___ 451 CGTCATTACCCGTTCGGCAGCTTTTTATCTCATGTGCTTGGATTTGCAGG 500
||.|||||.||||.|||.||||||||.||.|||||.||.||.|||||.||
RBAM_015030__ 451 CGCCATTATCCGTACGGAAGCTTTTTGTCCCATGTTCTCGGTTTTGCCGG 500
BSNT_02509___ 501 AATTGACAACCAAGGACTCCTTGGATTGGAAGCCTATTACGACGATGATT 550
.|||||.|||||.|..||.||.||.|||||.||.|||||.||.|||||.|
RBAM_015030__ 501 TATTGATAACCAGGTTCTTCTCGGTTTGGAGGCTTATTATGATGATGACT 550
BSNT_02509___ 551 TAAAAGGGGAAAAAGGTTCTGTCAAGTTTTATACAGATGCCAAGGGTAAA 600
|||||||.|.|||.||.|||||.||.||||||||.|||||||||||.||.
RBAM_015030__ 551 TAAAAGGTGTAAAGGGATCTGTGAAATTTTATACGGATGCCAAGGGGAAG 600
BSNT_02509___ 601 AAAATGCCTGATGAAGCGGATGACTATACGCCGCCTAAGGATGGGCTTGA 650
|||||||||||||||||||||||.||.||.||.||.||.||.||.|||||
RBAM_015030__ 601 AAAATGCCTGATGAAGCGGATGATTACACCCCTCCGAAAGACGGACTTGA 650
BSNT_02509___ 651 TATGAAGCTGACGGTTGATTCAAAGGTCCAGACGATAATGGAAAGAGAGC 700
||||||.||||||.||||..|.|||||.||||||||.||.||||||||||
RBAM_015030__ 651 TATGAAACTGACGATTGACGCCAAGGTTCAGACGATTATAGAAAGAGAGC 700
BSNT_02509___ 701 TTGATAACGCTGAGGCCAAATATCATCCGGACGGCATGATTGCCGTAGCC 750
|.||.||.||.|.|||.||||||.|.||||||||.||||||||.||.||.
RBAM_015030__ 701 TCGACAATGCAGCGGCGAAATATAACCCGGACGGAATGATTGCGGTCGCA 750
BSNT_02509___ 751 ATGAATCCGAAAAACGGAGAAATTTTGGGGATGTCTAGCAGGCCTGACTT 800
|||||||||||||||||.|||.|..|.||.|||||.|||.|.|||||.||
RBAM_015030__ 751 ATGAATCCGAAAAACGGGGAAGTGCTCGGCATGTCAAGCCGTCCTGATTT 800
BSNT_02509___ 801 CGACCCTGCTGATTACCAATCTGTTGATCCGTCCGTCTACAATCGAAACC 850
.||.||.|||||.||.|||||.||.|||||||||||.|||||.||.||||
RBAM_015030__ 801 TGATCCGGCTGACTATCAATCGGTGGATCCGTCCGTTTACAACCGGAACC 850
BSNT_02509___ 851 TGCCAGTATGGAGCACGTATGAACCGGGATCTACCTTTAAAATTATTACA 900
||||.|||||||||||.|||||||||||.||.||||||||.||||||||.
RBAM_015030__ 851 TGCCGGTATGGAGCACATATGAACCGGGTTCGACCTTTAAGATTATTACG 900
BSNT_02509___ 901 CTTGCAGCAGCCCTTGAAGAGCAAAAAGTAAATTTGAAACGGGATCAATT 950
|||||.||.||.|||.||||||||||||||||.|||.||.|.||.||.||
RBAM_015030__ 901 CTTGCGGCGGCTCTTCAAGAGCAAAAAGTAAACTTGCAAAGAGACCACTT 950
BSNT_02509___ 951 TTATGATAAAGGGCATGCGGAAGTGGACGGAGCGAGACTGCGGTGCTGGA 1000
||||||.|||||...|||.||.||.|||||.||..|.||.||.|||||||
RBAM_015030__ 951 TTATGACAAAGGATTTGCCGAGGTCGACGGCGCCCGCCTCCGATGCTGGA 1000
BSNT_02509___ 1001 AAAGAGGCGGGCACGGGCTT--CAGACGTATCTGGAAGTTGTGCAGAACT 1048
|||..|||||.||||| || ||..|.|||||.||||||||.||.||.|
RBAM_015030__ 1001 AAAAGGGCGGCCACGG--TTCGCAATCTTATCTTGAAGTTGTTCAAAATT 1048
BSNT_02509___ 1049 CCTGCAACCCGGGGTTTGTTGAATTAGGCGAGCGCTTAGGAAAGGAAAAG 1098
||||||||||.||||||||..|..|.||.||.||..|.|||||..|||||
RBAM_015030__ 1049 CCTGCAACCCCGGGTTTGTACAGCTCGGGGAACGGCTCGGAAAACAAAAG 1098
BSNT_02509___ 1099 CT-TTTCAAATATATCAAAGACTTTGGTTTTGGACAAAAAACGGGGATTG 1147
|| |||| |||||||.||.|||||.||.||||||.|.|||||.||.||||
RBAM_015030__ 1099 CTGTTTC-AATATATTAAGGACTTCGGCTTTGGAAAGAAAACAGGCATTG 1147
BSNT_02509___ 1148 ATCTCCAAGGCGAGGGAACAGGCATCTTATTCCCGCTTGAGAGAGTGGGC 1197
||||.|||||.||.|||||.||.|||||||||||||||||.|||||.|||
RBAM_015030__ 1148 ATCTGCAAGGGGAAGGAACGGGGATCTTATTCCCGCTTGACAGAGTCGGC 1197
BSNT_02509___ 1198 CCGGTGGAGCAAGCAACTACGGCTTTCGGACAGGGAGTATCCGTCACGCC 1247
|||||.||.||.||.||.||.|||||||||||.||.||.|||||||||||
RBAM_015030__ 1198 CCGGTCGAACAGGCGACAACCGCTTTCGGACAAGGGGTTTCCGTCACGCC 1247
BSNT_02509___ 1248 GATTCAGCAAGTTGCAGCAGTATCCGCCGCTGTAAACGGAGGAACGCTCT 1297
|||||||||.||.|||||.||.|||||.||..|||||||.||||||||.|
RBAM_015030__ 1248 GATTCAGCAGGTGGCAGCCGTTTCCGCAGCAATAAACGGCGGAACGCTTT 1297
BSNT_02509___ 1298 ATACACCTTATATTGCAAAGGAATGGATCGATCCTGTTACGAAGAAAACG 1347
||||.||.|.|||.||.||.||.|||.|.|||||.||||||||.|||||.
RBAM_015030__ 1298 ATACTCCGTTTATCGCCAAAGAGTGGGTTGATCCCGTTACGAAAAAAACC 1347
BSNT_02509___ 1348 GTCAAAAAACAATCACCAATCGCAAAGAAACAAGTCATTTCTGAGGAAAC 1397
||.||.||||||||.||.||.||.||.|..|||||.|||||..|||||||
RBAM_015030__ 1348 GTTAAGAAACAATCGCCGATTGCGAAAAGGCAAGTTATTTCCCAGGAAAC 1397
BSNT_02509___ 1398 ATCCAAACAAATCCGCTATGCTCTAGAAAGCGTCGTCGCAGAAGGAACCG 1447
.||.||.||.|||.|.||||||.||||||||||||||||..|.|||||.|
RBAM_015030__ 1398 GTCAAAGCAGATCAGATATGCTTTAGAAAGCGTCGTCGCTCAGGGAACGG 1447
BSNT_02509___ 1448 GCCGCAATGCATTTGTAGAAGGATATCGTGTCGGAGGAAAAACGGGAACT 1497
|.||.|||||.|||||.|||||||||||.|||||.||||||||.||.||.
RBAM_015030__ 1448 GGCGGAATGCCTTTGTGGAAGGATATCGCGTCGGCGGAAAAACAGGTACC 1497
BSNT_02509___ 1498 GCACAAAAGGTTAAAGATGGAAAATATCTTGAAAACAACCATATTGTATC 1547
|||||||||||.|||||.||.||||||||.||||||||||||||.||.||
RBAM_015030__ 1498 GCACAAAAGGTCAAAGACGGCAAATATCTCGAAAACAACCATATCGTCTC 1547
BSNT_02509___ 1548 ATTTATCGGTTTCGCGCCAGCTGATGATCCGAGTCTAGTCGTCTACGTTG 1597
.|||||||||||.|||||.||.|||||.|||||.||.|||||.||.||.|
RBAM_015030__ 1548 TTTTATCGGTTTTGCGCCGGCCGATGACCCGAGCCTTGTCGTGTATGTCG 1597
BSNT_02509___ 1598 CGGTGGATAACCCGAAAGGCACGATTCAGTTTGGCGGAACGGTGGCAGCG 1647
||||.|||||.|||||||||||||||||.||.||.|||||.||.||.|||
RBAM_015030__ 1598 CGGTTGATAATCCGAAAGGCACGATTCAATTCGGGGGAACCGTCGCCGCG 1647
BSNT_02509___ 1648 CCTATTGTCGGAAATATTATGAGAGACAGTCTGCCGGAACTTGGTGTGAA 1697
||.||||||||||||||.|||||||||||||||||.||.||.||.|||||
RBAM_015030__ 1648 CCGATTGTCGGAAATATGATGAGAGACAGTCTGCCTGAGCTCGGCGTGAA 1697
BSNT_02509___ 1698 GCTCCGGAAAAATCAAATCGAGAAAAAATACCAATGGAACGACACAAAAA 1747
.|..||.|||||||||||||||||||||||.|||||||||||||||||||
RBAM_015030__ 1698 ACCGCGAAAAAATCAAATCGAGAAAAAATATCAATGGAACGACACAAAAA 1747
BSNT_02509___ 1748 CAATAGAAGTTCCGAATGTTGTAGGGATGTCTGTCTCAGATCTTGAGTCA 1797
|||||||.|||||||||||||||||||||||||||||.|||||||||||.
RBAM_015030__ 1748 CAATAGAGGTTCCGAATGTTGTAGGGATGTCTGTCTCTGATCTTGAGTCG 1797
BSNT_02509___ 1798 CTATTGGTGAATCTCAATGTGGATGCTTCCGGGAAAGGGAGCAAAATCGT 1847
||..|.||.|||.|.|||.|.||..|.||.||.|||||.||||||||.||
RBAM_015030__ 1798 CTGCTTGTCAATTTGAATATTGACTCCTCAGGAAAAGGAAGCAAAATTGT 1847
BSNT_02509___ 1848 TAAACAATCGCCAGCTGCCGGAACGAAAGTAAAAGAAGGCTCAAAGATAC 1897
.||||||||.||.||.||||||||||||||||||||||||||||||||.|
RBAM_015030__ 1848 GAAACAATCACCTGCAGCCGGAACGAAAGTAAAAGAAGGCTCAAAGATCC 1897
BSNT_02509___ 1898 GCGTGTATTTGACTGAAGAAGATGAAAAGGAGGCAGCCGATTGA 1941
|.||.||.||||.|||||| ||||
RBAM_015030__ 1898 GTGTTTACTTGAGTGAAGA--ATGA------------------- 1920
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