Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02532 and RBAM_015160

See Amino acid alignment / Visit BSNT_02532 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:19
# Commandline: needle
#    -asequence dna-align/BSNT_02532___sigG.1.9828.seq
#    -bsequence dna-align/RBAM_015160___sigG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02532___sigG-RBAM_015160___sigG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02532___sigG-RBAM_015160___sigG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02532___sigG
# 2: RBAM_015160___sigG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 783
# Identity:     623/783 (79.6%)
# Similarity:   623/783 (79.6%)
# Gaps:          69/783 ( 8.8%)
# Score: 2751.0
# 
#
#=======================================

BSNT_02532___      0 --------------------------------------------------      0
                                                                       
RBAM_015160__      1 GTGTCAAGAAATAAAGTCGAAATTTGCGGGGTGGATACCTCCAAATTACC     50

BSNT_02532___      1 -------------------ATGGGAAAGCTGTTTAGGCAGCTGCAGGATG     31
                                        |||.||||||||||||||||..|.|||||||
RBAM_015160__     51 GGTGCTCAAGAATGAAGAGATGAGAAAGCTGTTTAGGCAATTACAGGATG    100

BSNT_02532___     32 AAGGCGATGATTCAGCAAGAGAAAAGCTTGTAAACGGGAACTTGCGTCTT     81
                     |.||||||||||||||.||.|||||||||||||||||.||..||||.|||
RBAM_015160__    101 AGGGCGATGATTCAGCGAGGGAAAAGCTTGTAAACGGCAATCTGCGCCTT    150

BSNT_02532___     82 GTCTTAAGTGTCATTCAACGATTTAATAACAGAGGGGAGTATGTTGATGA    131
                     ||||||||.||||||||..|.|||||.||||||||.||||||||||||||
RBAM_015160__    151 GTCTTAAGCGTCATTCAGAGGTTTAACAACAGAGGAGAGTATGTTGATGA    200

BSNT_02532___    132 CTTATTTCAAGTCGGCTGCATCGGACTAATGAAATCCATTGATAATTTTG    181
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
RBAM_015160__    201 CTTATTTCAGGTCGGCTGCATCGGACTAATGAAATCCATTGATAATTTTG    250

BSNT_02532___    182 ACCTAAGCCACAATGTTAAGTTTTCAACATACGCTGTACCTATGATTATC    231
                     ||||||||||.|||||||||||||||||||||||||||||.|||||.|||
RBAM_015160__    251 ACCTAAGCCATAATGTTAAGTTTTCAACATACGCTGTACCGATGATCATC    300

BSNT_02532___    232 GGAGAGATCCGCAGGTATTTACGCGATAATAACCCGATCCGTGTCTCAAG    281
                     |||||.||||||||.|||||.||.|||||.||.||||||||.|||||.||
RBAM_015160__    301 GGAGAAATCCGCAGATATTTGCGGGATAACAATCCGATCCGCGTCTCGAG    350

BSNT_02532___    282 ATCACTCCGGGACATCGCTTACAAGGCGCTTCAGGTAAGAGAGCGGTTAA    331
                     .||.||.||.||.|||||.||.||.||||||||.||||||||||||||||
RBAM_015160__    351 GTCGCTTCGCGATATCGCATATAAAGCGCTTCAAGTAAGAGAGCGGTTAA    400

BSNT_02532___    332 TCAGTGAGACAAGCAAGGAGCCGACTGCAGAAGACATCGCAAAAGTTCTT    381
                     |||||||||||||||.|||||||||.|||||.||.|||||.|||||||||
RBAM_015160__    401 TCAGTGAGACAAGCAGGGAGCCGACAGCAGAGGAAATCGCCAAAGTTCTT    450

BSNT_02532___    382 GAAGTACCGCATGAGGAAATTGTATTTGCGCTTGATGCCATCCAGGATCC    431
                     |||||.||.|||||.||||||||.|||||.|||||.||||||||||||||
RBAM_015160__    451 GAAGTGCCCCATGAAGAAATTGTGTTTGCCCTTGACGCCATCCAGGATCC    500

BSNT_02532___    432 GGTTTCTCTATTTGAACCGATCTATAACGACGGCGGAGACCCGATCTATG    481
                     ||||||.||.|||||.|||||.|||||.||||||||.||.|||||.||.|
RBAM_015160__    501 GGTTTCACTGTTTGAGCCGATTTATAATGACGGCGGCGATCCGATTTACG    550

BSNT_02532___    482 TGATGGACCAAATCAGTGATGAGCGTAATACAGATTCACAATGGATTGAA    531
                     ||||||||||.|||||.||||||||.||||..|||.|||||||||||||.
RBAM_015160__    551 TGATGGACCAGATCAGCGATGAGCGCAATAAGGATACACAATGGATTGAG    600

BSNT_02532___    532 GAGCTGGCTTTAAAAGAGGGCATGAGAAGGCTGAACGATAGGGAAAAAAT    581
                     |||||.|||.|.|||||.|||||||||||.||||||||..||||||||||
RBAM_015160__    601 GAGCTCGCTCTGAAAGAAGGCATGAGAAGACTGAACGAACGGGAAAAAAT    650

BSNT_02532___    582 GATTTTGAGAAAGCGATTCTTCCAAGGGAAAACCCAAATGGAAGTCGCCG    631
                     |||||||.|||||||.||.|||||||||||.|||||||||||||||||.|
RBAM_015160__    651 GATTTTGCGAAAGCGCTTTTTCCAAGGGAAGACCCAAATGGAAGTCGCTG    700

BSNT_02532___    632 AGGAAATCGGAATTTCTCAGGCGCAGGTGTCCAGACTTGAAAAAGCGGCT    681
                     |.||||||||.||.||.||.||.|||||.||.||.|||||||||||.||.
RBAM_015160__    701 AAGAAATCGGCATATCCCAAGCTCAGGTCTCAAGGCTTGAAAAAGCAGCC    750

BSNT_02532___    682 ATCAAACAAATGAATAAAAATATTCATCAATAA    714
                     ||.||||||||||||||.|||||.|||||||||
RBAM_015160__    751 ATTAAACAAATGAATAAGAATATCCATCAATAA    783


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