Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02552 and RBAM_015290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:21
# Commandline: needle
# -asequence dna-align/BSNT_02552___ylyB.1.9828.seq
# -bsequence dna-align/RBAM_015290___ylyB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02552___ylyB-RBAM_015290___ylyB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02552___ylyB-RBAM_015290___ylyB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02552___ylyB
# 2: RBAM_015290___ylyB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 917
# Identity: 722/917 (78.7%)
# Similarity: 722/917 (78.7%)
# Gaps: 7/917 ( 0.8%)
# Score: 2807.0
#
#
#=======================================
BSNT_02552___ 1 ATGAATCAAATTGATATAACCGCTTCAG-AAGAACAAAAAAGTGAGCGGA 49
|||||||||.||||.||||||| ||||| ..||||||||.||.||.||||
RBAM_015290__ 1 ATGAATCAATTTGAGATAACCG-TTCAGCCTGAACAAAAGAGCGAACGGA 49
BSNT_02552___ 50 TTGATAAATTTTTGGCATCGTC-TGAGAATGATTGGTCAAGAACCCAGGT 98
||||||||||||||||.||..| .||||| .|.||||||.|.||.||.||
RBAM_015290__ 50 TTGATAAATTTTTGGCTTCAACGGGAGAA-AACTGGTCACGCACTCAAGT 98
BSNT_02552___ 99 TCAGCAATGGGTAAAAGACGGACAGGTTGTCGTGAACGGAAGCGCGGTGA 148
.|||||||||||||||||.||||.|||...|||.|||||.|...|.||.|
RBAM_015290__ 99 GCAGCAATGGGTAAAAGAGGGACTGGTATCCGTTAACGGCAAATCCGTAA 148
BSNT_02552___ 149 AAGCGAATTATAAAATTCAGCCGGGTGATCAGGTGACCGTCACTGTACCC 198
||||||||||||||||.|||||.||.||||||||.|.||||||..|.||.
RBAM_015290__ 149 AAGCGAATTATAAAATGCAGCCCGGCGATCAGGTAAACGTCACCATTCCT 198
BSNT_02552___ 199 GAACCGGAAGCGCTCGACGTCCTGGCAGAGCCTATGGATCTGGATATTTA 248
||||||||||...|.|||||.||.|||||.||.||||||.||||.|||||
RBAM_015290__ 199 GAACCGGAAGAATTGGACGTGCTTGCAGAACCGATGGATTTGGACATTTA 248
BSNT_02552___ 249 TTATGAGGACCAGGATGTGCTGGTCGTCAACAAACCTCGCGGAATGGTTG 298
.|||||.|||||||||||..||||.||.||||||||.||.||.|||||||
RBAM_015290__ 249 CTATGAAGACCAGGATGTCTTGGTTGTGAACAAACCGCGGGGCATGGTTG 298
BSNT_02552___ 299 TTCACCCAGCACCCGGGCATCTTACGGGCACACTTGTAAACGGCCTTATG 348
|.|||||.||.|||||.|||.|.||.||.||.|||||||||||.||.|||
RBAM_015290__ 299 TACACCCGGCGCCCGGCCATGTGACAGGGACGCTTGTAAACGGACTGATG 348
BSNT_02552___ 349 GCTCATTGCACAGACCTTTCCGGAATAAATGGCGTGATGCGTCCGGGTAT 398
|||||.||||..|||||||||||.||.||.|||||.|||||.|||||.||
RBAM_015290__ 349 GCTCACTGCAACGACCTTTCCGGCATTAACGGCGTCATGCGCCCGGGAAT 398
BSNT_02552___ 399 TGTTCACAGAATCGATAAGGACACGTCCGGTTTATTAATGGTGGCGAAAA 448
.||.|||.|.||.|||||.||.||.||||||.|.||||||||.||.||||
RBAM_015290__ 399 CGTCCACCGGATTGATAAAGATACTTCCGGTCTGTTAATGGTCGCTAAAA 448
BSNT_02552___ 449 ATGATATGGCACACGAGTCACTCGTAAACCAATTGGTCAACAAAACGGTC 498
|.||||||||.||.||.||||||||.||.||..|.|||||.|||||.||.
RBAM_015290__ 449 ACGATATGGCGCATGAATCACTCGTTAATCAGCTCGTCAATAAAACCGTG 498
BSNT_02552___ 499 ACCCGAAAATATACGGCCGTTGTCCACGGGCTTATTTCTCACGATGACGG 548
|||.||||.||.||.||.||||||||||||.|.|||||.||.||||||||
RBAM_015290__ 499 ACCAGAAAGTACACAGCGGTTGTCCACGGGGTGATTTCACATGATGACGG 548
BSNT_02552___ 549 CACAATTGACGCGCCGATCGGACGAGATAAGAAAGACCGTCAAAGCATGA 598
.||.||||||||.||||||||..|||||||.|||||||||||||||||||
RBAM_015290__ 549 AACGATTGACGCTCCGATCGGGAGAGATAAAAAAGACCGTCAAAGCATGA 598
BSNT_02552___ 599 CCGTGACACGTGA---TGGCAAAAGCGCTGTCACTCATTTTCATGTACTA 645
||||.|||.|.|| ..||||||.|||.|||||.|||||.||.||.||.
RBAM_015290__ 599 CCGTAACAAGAGAAAGCAGCAAAAACGCCGTCACGCATTTCCACGTGCTT 648
BSNT_02552___ 646 GAGCGTTTTCAGGATTTTACGTTAGTGGAATGCCAGCTTGAAACAGGGAG 695
|||||||||||.|||||.|||.|.||.||.||||.||||||.||.||.||
RBAM_015290__ 649 GAGCGTTTTCAAGATTTCACGCTCGTAGAGTGCCGGCTTGAGACCGGAAG 698
BSNT_02552___ 696 AACCCATCAAATTCGTGTTCATATGAGATATATCGGCTTCCCATTAGCAG 745
|||.|||||.||.|||||||||||||.|||||||||.||.||.||.||.|
RBAM_015290__ 699 AACGCATCAGATCCGTGTTCATATGAAATATATCGGGTTTCCTTTGGCGG 748
BSNT_02552___ 746 GCGATCCGAAATACGGCCCAAGAAAAACAATCGACTTTAATGGCCAAGCG 795
||||.|||||.|||||.||.||||||||.||.||.||.|||||.||.|||
RBAM_015290__ 749 GCGACCCGAAGTACGGACCGAGAAAAACCATTGATTTCAATGGTCAGGCG 798
BSNT_02552___ 796 CTTCACGCGGGAGTTTTAGGTTTTGACCATCCACGAACAGGAGAATATGT 845
|||||.||.|||.|.|||||||||||.|||||.||.||.||.|||||..|
RBAM_015290__ 799 CTTCATGCCGGAATATTAGGTTTTGATCATCCGCGGACGGGCGAATACAT 848
BSNT_02552___ 846 CGAATTTGAAGCGCCGCTTCCTGAGGATATGGCAGAATTAATCGAAAACC 895
.||.|||||||||||.||||||||.||||||..|.||.|.||.|||.|..
RBAM_015290__ 849 GGAGTTTGAAGCGCCCCTTCCTGAAGATATGAAAAAACTCATTGAAGATT 898
BSNT_02552___ 896 TCAGAAAAAATGGTTGA 912
|.|||||.|....||||
RBAM_015290__ 899 TAAGAAATAGCCATTGA 915
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