Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02553 and RBAM_015300
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:21
# Commandline: needle
# -asequence dna-align/BSNT_02553___pyrR.1.9828.seq
# -bsequence dna-align/RBAM_015300___pyrR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02553___pyrR-RBAM_015300___pyrR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02553___pyrR-RBAM_015300___pyrR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02553___pyrR
# 2: RBAM_015300___pyrR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 547
# Identity: 449/547 (82.1%)
# Similarity: 449/547 (82.1%)
# Gaps: 2/547 ( 0.4%)
# Score: 1841.0
#
#
#=======================================
BSNT_02553___ 1 TTGAATCAAAAAGCTGTCATTCTCGACGAACAGGCAATCAGACGGGCGCT 50
.||||||||||||||||.|||||||||||||||||.|||||.||||||||
RBAM_015300__ 1 GTGAATCAAAAAGCTGTTATTCTCGACGAACAGGCGATCAGGCGGGCGCT 50
BSNT_02553___ 51 GACCAGGATTGCTCACGAAATGATCGAACGCAATAAAGGAATGAATAACT 100
|||.|||||.||.||.||||||||||||||.|||||||||||||||.|||
RBAM_015300__ 51 GACAAGGATAGCCCATGAAATGATCGAACGGAATAAAGGAATGAATGACT 100
BSNT_02553___ 101 GCATTCTTGTCGGCATTAAGACAAGAGGGATTTACCTGGCAAAACGCCTT 150
||||||||||.||.|||||.||||||||.|||||..|.||.||.||.||.
RBAM_015300__ 101 GCATTCTTGTAGGAATTAAAACAAGAGGCATTTATTTAGCGAAGCGGCTG 150
BSNT_02553___ 151 GCGGAACGCATTGAACAGATTGAGGGAAATCCTGTTACAGTCGGTGAAAT 200
||.||.||.||.|||||||||||.||.|||||.||.||.|||||.|||||
RBAM_015300__ 151 GCTGAGCGGATCGAACAGATTGAAGGGAATCCGGTCACCGTCGGGGAAAT 200
BSNT_02553___ 201 TGATATTACTCTTTACAGAGACGATCTTTCTAAAAAAACAAGCAACGATG 250
.|||||.||.||||||.|.|||||.||..|.||||||||.|||||.||.|
RBAM_015300__ 201 CGATATCACCCTTTACCGTGACGACCTGACGAAAAAAACGAGCAATGAAG 250
BSNT_02553___ 251 AACCGCTTGTAAAAGGTGCAGATATTCCGGTAGATATTACAGATCAAAAA 300
|.||||||||||||||.||.||.|||||||..|||||.|||||.|||||.
RBAM_015300__ 251 AGCCGCTTGTAAAAGGCGCGGACATTCCGGCCGATATCACAGACCAAAAG 300
BSNT_02553___ 301 GTCATTCTCGTTGATGATGTTCTGTATACCGGAAGAACAGTCAGAGCAGG 350
||||||.|.|||||||||||.||.||||||||..|.||.||.|||||.|.
RBAM_015300__ 301 GTCATTGTGGTTGATGATGTGCTTTATACCGGCCGGACGGTGAGAGCTGC 350
BSNT_02553___ 351 AATGGATGCGCTTGTTGATGTAGGCAGACCTTCCTCCATTCAGCTTGCAG 400
.||||||||.||.||||||||.||..|.||.||.||.||.||||||||.|
RBAM_015300__ 351 GATGGATGCCCTCGTTGATGTCGGACGGCCGTCATCGATACAGCTTGCCG 400
BSNT_02553___ 401 TGCTTGTGGACAGAGGACACCGGGAGCTGCCGATCCGAGCGGATTATATC 450
|||||||.||||||||.||||||||||||||||||.|||||||.||||||
RBAM_015300__ 401 TGCTTGTCGACAGAGGGCACCGGGAGCTGCCGATCAGAGCGGACTATATC 450
BSNT_02553___ 451 GGGAAAAACATCCCGACATCAAAGTCTGAAAAGGTTATGGTTCAGCTTGA 500
|||||||||||.|||||.|||||..|||||||.||.|||||||||| |||
RBAM_015300__ 451 GGGAAAAACATTCCGACCTCAAAAGCTGAAAAAGTGATGGTTCAGC-TGA 499
BSNT_02553___ 501 -TGAGGTAGACCAAAACGATCTCGTCGCCATTTATGAAAACGAATAA 546
.||.||.||.||.|..|||.|.|||||||||||.|||||.||||||
RBAM_015300__ 500 GCGAAGTTGATCAGACTGATATGGTCGCCATTTACGAAAATGAATAA 546
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