Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02554 and RBAM_015310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:21
# Commandline: needle
# -asequence dna-align/BSNT_02554___pyrP.1.9828.seq
# -bsequence dna-align/RBAM_015310___pyrP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02554___pyrP-RBAM_015310___pyrP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02554___pyrP-RBAM_015310___pyrP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02554___pyrP
# 2: RBAM_015310___pyrP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1410
# Identity: 1047/1410 (74.3%)
# Similarity: 1047/1410 (74.3%)
# Gaps: 114/1410 ( 8.1%)
# Score: 4141.5
#
#
#=======================================
BSNT_02554___ 1 ATGCCTCTTTGCGTAAAAAAGCAAAGAGGTTTTTTTATACAGTCATTGAG 50
RBAM_015310__ 0 -------------------------------------------------- 0
BSNT_02554___ 51 TCATCCTAAAATGAAAGTCAACAATCAGGGGGAAATCATCATGAGTAAGA 100
||||||||||
RBAM_015310__ 1 ----------------------------------------ATGAGTAAGA 10
BSNT_02554___ 101 AAAAAGTAAATTTAGGGGTCAGGGATGTCCCGACACCTTTCTCTTGGGTT 150
||||||||||..|.||.||||||||||||||.|..||.||.||.|||.|.
RBAM_015310__ 11 AAAAAGTAAACCTGGGAGTCAGGGATGTCCCCAATCCATTGTCCTGGCTG 60
BSNT_02554___ 151 TCATTCAGCCTTCAGCATTTGTTTGCCATGTTTGGCTCAACCATTTTGGT 200
|||||||||||.||||||||.||.||||||||.||.||||||||..|.||
RBAM_015310__ 61 TCATTCAGCCTGCAGCATTTATTCGCCATGTTCGGTTCAACCATACTCGT 110
BSNT_02554___ 201 TCCGAAGCTCGTCGGAATGAGTCCTGCTGTGGCGTTGGTGACAAGCGGCA 250
.|||||.||.|||||||||||.||.||.||||||.|.||.||.|||||.|
RBAM_015310__ 111 GCCGAAACTGGTCGGAATGAGCCCGGCAGTGGCGCTTGTCACGAGCGGAA 160
BSNT_02554___ 251 TCGGAACACTGGCGTACCTTCTT-ATTACGAAAGGGCAAATTCCGGCGTA 299
||||.|||||.||.||.| |||| .|.||.|||||.||.|||||.||.||
RBAM_015310__ 161 TCGGGACACTCGCCTATC-TCTTGGTGACAAAAGGCCAGATTCCCGCTTA 209
BSNT_02554___ 300 TCTCGGTTCATCCTTCGCCTTTATTTCTCCGATCATTCTGGTAAAAGCGA 349
||||||.|||||.|||||||||||.||.|||||.||..||||.||.||||
RBAM_015310__ 210 TCTCGGCTCATCATTCGCCTTTATATCACCGATTATCTTGGTGAAGGCGA 259
BSNT_02554___ 350 CCGGCGGGCCAGGAGCGGCAATGGTTGGAGCGTTTCTTGCAGGGCTGGTG 399
|.||.|||||.||.||.||.|||||.||.||.||.||.||.||..|.|||
RBAM_015310__ 260 CGGGAGGGCCGGGGGCTGCCATGGTCGGCGCTTTCCTGGCGGGAATTGTG 309
BSNT_02554___ 400 TACGGGCTGATTGC-CTTATTGATCAGGCAGCTTGGAACAGGATGGCTGA 448
|||||.|||||.|| ||| .|.|||||||||||||||||.||.|||||||
RBAM_015310__ 310 TACGGCCTGATCGCGCTT-CTCATCAGGCAGCTTGGAACGGGGTGGCTGA 358
BSNT_02554___ 449 TCAAGATTCTCCCGCCTGTAGTCGTAGGGCCTGTTATTATCGTCATCGGG 498
|.|||.|.||.||.||.||.|||||.|||||.||.||.|||||||||||.
RBAM_015310__ 359 TGAAGCTGCTGCCCCCGGTGGTCGTCGGGCCGGTCATCATCGTCATCGGC 408
BSNT_02554___ 499 CTGGGACTGGCAAGCACTGCGGTAAACATGGCGATGTATGCTGATCCAAA 548
||.||||||||||||||.||.||.||.|||||.||||||||.|||||.||
RBAM_015310__ 409 CTCGGACTGGCAAGCACAGCCGTCAATATGGCAATGTATGCCGATCCGAA 458
BSNT_02554___ 549 CGCGAGTGAGTTGGTCTACAGCTTAAAGCACTTTAGTGTCGCAGGAGTTA 598
.||.|..||..|.|||||||||||.||.||.||.|||||.||.||.||.|
RBAM_015310__ 459 TGCAAAGGAACTCGTCTACAGCTTGAAACATTTCAGTGTAGCCGGCGTCA 508
BSNT_02554___ 599 CGCTGGCAATTACGATTATTTGTGCGATTTTCTTACGAGGATTTTTAAGC 648
|..|||||||.||.||||||||.||.||.||.||||||||||||||||||
RBAM_015310__ 509 CTTTGGCAATCACCATTATTTGCGCCATCTTTTTACGAGGATTTTTAAGC 558
BSNT_02554___ 649 CTGATTCCGGTTCTGATCGGAATCATCGGCGGATACTTGTTCGCCCTTAC 698
|||||||||||..|||||||.||.||.|||||.||..||||.||.||.||
RBAM_015310__ 559 CTGATTCCGGTATTGATCGGCATTATAGGCGGCTATCTGTTTGCGCTGAC 608
BSNT_02554___ 699 TCAAGGGATTGTCAACTTCCAGCCGGTGCTTGACGCGAAATGGTTTGCAG 748
.||.||.||.|||||.||.||||||||..||||.||.||.|||||.||.|
RBAM_015310__ 609 ACAGGGCATCGTCAATTTTCAGCCGGTCATTGATGCAAAGTGGTTCGCCG 658
BSNT_02554___ 749 TGCCTGAATTTATCATTCCGTTCAAAGATTATTCACCGTCAGTTACACTC 798
|.||||||||||||||.||.||||||||.|||.|.||||||||.|||.|.
RBAM_015310__ 659 TTCCTGAATTTATCATCCCTTTCAAAGACTATACGCCGTCAGTGACATTG 708
BSNT_02554___ 799 GGCATCGCAGCCGCAATGGTTCCTGTCGCATTTGTCACAATGTCAGAGCA 848
|||||.||.||.||.|||||.||.|||||.||.||.||.||||||||.||
RBAM_015310__ 709 GGCATTGCGGCTGCGATGGTGCCGGTCGCTTTCGTGACGATGTCAGAACA 758
BSNT_02554___ 849 TATCGGCCACCAAATGGTGCTGAGCAAGGTTGTCGGACAAGATTTCATTA 898
||||||||||||||||||||||||.||.||.||||||||.||||||||||
RBAM_015310__ 759 TATCGGCCACCAAATGGTGCTGAGTAAAGTCGTCGGACAGGATTTCATTA 808
BSNT_02554___ 899 AAAAGCCAGGTCTTCATCGCTCTATTATGGGTGACAGTGTGGCGACAATC 948
|||||||.||.||.||.|||||.||.|||||.|||||.||.|||||.||.
RBAM_015310__ 809 AAAAGCCGGGACTGCACCGCTCCATAATGGGGGACAGCGTAGCGACGATT 858
BSNT_02554___ 949 CTCGCTTCCCTGATCGGCGGTCCGCCGACAACGACATACGGAGAAAACAT 998
.|||||||..|.||||||||.||||||||.|||||||||||.||.|||||
RBAM_015310__ 859 ATCGCTTCGTTAATCGGCGGCCCGCCGACGACGACATACGGCGAGAACAT 908
BSNT_02554___ 999 TGGCGTACTGGCCATCACAAGAGTATTCAGCGTCTTTGTCATCGGAGGAG 1048
.||.||||||||.||.||.|||||.||||||||||||||||||||.||.|
RBAM_015310__ 909 CGGAGTACTGGCAATTACGAGAGTTTTCAGCGTCTTTGTCATCGGTGGCG 958
BSNT_02554___ 1049 CGGCAGTGATTGC-TTGTTGCTTCGGCTTTATAGGCAAAATTTCAGCGCT 1097
|||..|||||||| .|| ||||||||.|||||.||.|||.|.||||||||
RBAM_015310__ 959 CGGGTGTGATTGCGCTG-TGCTTCGGATTTATCGGAAAAGTATCAGCGCT 1007
BSNT_02554___ 1098 GATCAGTTCAGTGCCATCAGCGGTCATGGGAGGCGTCTCCTTCCTGCTGT 1147
||||||.||.||.||.||.|||||.|||||||||||.|||||||||||.|
RBAM_015310__ 1008 GATCAGCTCTGTTCCGTCCGCGGTTATGGGAGGCGTTTCCTTCCTGCTCT 1057
BSNT_02554___ 1148 TCGGAATCATTGCTTCAAGCGGCCTGAGAATGCTGATTGACAACAAAATT 1197
|||||||.||.||.||.||||||.|.||||||||||||||||||||.|||
RBAM_015310__ 1058 TCGGAATTATCGCCTCCAGCGGCTTAAGAATGCTGATTGACAACAACATT 1107
BSNT_02554___ 1198 GATTATGAAAACAACAGAAACCTCATTATTACATCAGTTATCCTTGTCAT 1247
||||||||||||||.|||||..|.|||||.|||||.||.|||||.||.||
RBAM_015310__ 1108 GATTATGAAAACAAGAGAAATTTAATTATCACATCCGTCATCCTCGTGAT 1157
BSNT_02554___ 1248 CGGTGTAGGAGGAGCTTTTATCCAAGTGTCTCAAGGCGGATTCCAAGTGT 1297
|||.||.|||||.||||||||.|||||.||..|||||||.||||||.|.|
RBAM_015310__ 1158 CGGCGTCGGAGGGGCTTTTATTCAAGTATCAAAAGGCGGGTTCCAAATAT 1207
BSNT_02554___ 1298 CAGGAATGGCGCTTGCCGCAATTGTCGGTGTCATCTTAAACCTGATTCTT 1347
|.||.|||||||||||.|||||.|||||.||||||.|.|||||.||.||.
RBAM_015310__ 1208 CCGGCATGGCGCTTGCGGCAATCGTCGGAGTCATCCTGAACCTTATCCTG 1257
BSNT_02554___ 1348 CCGCAGGCGAAGGAAGAGCAGACAGAC------ACATCTG------AACA 1385
|||||.||.||.||||| |||| .||||.| ||.|
RBAM_015310__ 1258 CCGCATGCAAATGAAGA------AGACGCGATTGCATCAGAAAAACAAAA 1301
BSNT_02554___ 1386 TCATATCTAA 1395
||||||.|||
RBAM_015310__ 1302 TCATATATAA 1311
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