Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02561 and RBAM_015370

See Amino acid alignment / Visit BSNT_02561 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:23
# Commandline: needle
#    -asequence dna-align/BSNT_02561___pyrD.1.9828.seq
#    -bsequence dna-align/RBAM_015370___pyrD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02561___pyrD-RBAM_015370___pyrD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02561___pyrD-RBAM_015370___pyrD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02561___pyrD
# 2: RBAM_015370___pyrD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 948
# Identity:     740/948 (78.1%)
# Similarity:   740/948 (78.1%)
# Gaps:          24/948 ( 2.5%)
# Score: 2847.5
# 
#
#=======================================

BSNT_02561___      1 ATGCTAGAGGTGAAATTGCCGGGACTTGATTTGAAAAACCCAATCATTCC     50
                     |||.||||||||||..|||||||.||..|.|||||||||||.|||||.||
RBAM_015370__      1 ATGTTAGAGGTGAATCTGCCGGGTCTCCAATTGAAAAACCCGATCATCCC     50

BSNT_02561___     51 TGCATCAGGCTGCTTCGGTTTTGGAAAAGAATTTTCACGTTTTTATGATT    100
                     .||.||.||.||.||||||||.||.|||||||.|.|..|.|||||.||||
RBAM_015370__     51 CGCTTCCGGATGTTTCGGTTTCGGGAAAGAATATGCCGGATTTTACGATT    100

BSNT_02561___    101 TGTCTTGTCTTGGAGCCATCATGATTAAGGCTACGAC-AAAGGAGCCACG    149
                     |.||.||.||.||||.|||.||||||||.||.||||| ||.|.|||| ||
RBAM_015370__    101 TATCATGCCTCGGAGGCATTATGATTAAAGCCACGACGAACGAAGCC-CG    149

BSNT_02561___    150 CTTTGGGAATCCGACGCCGCGGGTAGCTGAGACTGGTGCTGGAATGCTCA    199
                     |||.||.||||||||||||.|.||.||.|||||..|.||.||||||||.|
RBAM_015370__    150 CTTCGGAAATCCGACGCCGAGAGTGGCGGAGACAAGCGCGGGAATGCTGA    199

BSNT_02561___    200 ATGCGATCGGTCTCCAAAATCCGGGGCTGGATAGCGTGTTGC---ATAAT    246
                     ||||.|||||.||.||||||||.||.||.|  |||.|| |||   ||.||
RBAM_015370__    200 ATGCCATCGGACTGCAAAATCCCGGCCTTG--AGCATG-TGCTCAATCAT    246

BSNT_02561___    247 GAGCTGCCGTGGCTTGAGCAGTTTGATACGCCGATCATTGCCAATGTCGC    296
                     ||||||||.|||||.||.||.|||||.||||||||.||.||.||||||||
RBAM_015370__    247 GAGCTGCCTTGGCTCGAACAATTTGACACGCCGATTATCGCAAATGTCGC    296

BSNT_02561___    297 AGGTTCTCAAGTCGAGGATTATGTTGAAGTCGCAGAGCATATCAGCAAAG    346
                     .||||||||.||.||.||.|||...|||||.||.|||||.||||||.|||
RBAM_015370__    297 GGGTTCTCAGGTGGACGACTATAAAGAAGTGGCCGAGCACATCAGCCAAG    346

BSNT_02561___    347 CGCCTAATGTTCATGCTCTTGAATTGAATATTTCCTGCCCGAATGTGAAA    396
                     ||||.|||||.|||||.|||||..|.||.|||||.||.||||||||.|||
RBAM_015370__    347 CGCCGAATGTGCATGCGCTTGAGCTTAACATTTCATGTCCGAATGTCAAA    396

BSNT_02561___    397 ACAGGCGGAATCGCTTTTGGCACGAATCCTGAAATGGCTGCCGATTTGAC    446
                     ||.||.||.||.||||||||.||..||||.|..|||||.|||||..||||
RBAM_015370__    397 ACGGGGGGGATTGCTTTTGGTACTGATCCCGTCATGGCGGCCGAACTGAC    446

BSNT_02561___    447 AAAAGCGGTGAAAGAGGTTT-CGAATGTACCCGTTTATGTGAAGCTTTCT    495
                     |||||||||||||||.|||| ||.| ||.||.||.||||||||||||||.
RBAM_015370__    447 AAAAGCGGTGAAAGAAGTTTCCGCA-GTGCCTGTGTATGTGAAGCTTTCG    495

BSNT_02561___    496 CCGAACGTGGCCAATATCACAGAAATTGCATTAGCGATCGAGGAAGCGGG    545
                     ||.||.||.||.||.||.||.||.|||||...||||||.||.|..||.||
RBAM_015370__    496 CCTAATGTCGCAAACATAACCGAGATTGCCAAAGCGATTGAAGCGGCCGG    545

BSNT_02561___    546 AGCGGACGGTCTTACGATGATCAACACACTAATCGGCATGAGACTCGATT    595
                     .||.||||||||.||||||||.||.|||||.|||||.|||||.||||||.
RBAM_015370__    546 TGCTGACGGTCTGACGATGATTAATACACTCATCGGGATGAGGCTCGATC    595

BSNT_02561___    596 TAAAAAC----CGGCAAACCGATATTAGCGAATAAAACAGGGGGACTTTC    641
                     |.||.||    |||    |||||.|||||.||||||||.||.|||||.||
RBAM_015370__    596 TCAAGACGGGACGG----CCGATCTTAGCAAATAAAACGGGCGGACTGTC    641

BSNT_02561___    642 AGGCCCTGCTGTGAAGCCGGTTGCCATTCGCATGGTGTATGAAGTCAGCC    691
                     ||||||.||..|.||.|||||.|||||.||.|||||.||.||||||||||
RBAM_015370__    642 AGGCCCGGCGATCAAACCGGTCGCCATCCGGATGGTATACGAAGTCAGCC    691

BSNT_02561___    692 AGGTGGTCAACATCCCGATTATCGGAATGGGAGGCGTGCAGACGGCTGAA    741
                     |||..||..|.||||||||||||||.|||||.|||||.|||||.||.||.
RBAM_015370__    692 AGGCCGTTCATATCCCGATTATCGGGATGGGCGGCGTTCAGACCGCAGAG    741

BSNT_02561___    742 GATGCCCTGGAATTTCTTCTCGCGGGAGCAAGCGCAGTCGCTGTCGGAAC    791
                     |||||..|.|||||||||||.||||||||.||.||.||.||.|||||.||
RBAM_015370__    742 GATGCATTAGAATTTCTTCTTGCGGGAGCGAGTGCGGTTGCCGTCGGCAC    791

BSNT_02561___    792 AGCAAACTTTGTGAATCCTTTTGCATGTCCAGAGATTATTGAACAGCTCC    841
                     .||||||||.||.|||||.||.|..||.||.||.||.||.||||||||||
RBAM_015370__    792 GGCAAACTTCGTCAATCCGTTCGTCTGCCCGGAAATCATAGAACAGCTCC    841

BSNT_02561___    842 CATCTGTTTTGCGCCAATACGGCTATCAATCAATTGAA---GAATGCATC    888
                     |...|||..||||.||||||||||.||||||   ||.|   |||||||||
RBAM_015370__    842 CCCGTGTGCTGCGTCAATACGGCTTTCAATC---TGTAAGTGAATGCATC    888

BSNT_02561___    889 GGAAGGAGCTGGAATCATGAAAAACAACCTGCCCATCATCGCGCTTGA    936
                     ||||||||||||||.|||||||||||||||||||||||||||||||||
RBAM_015370__    889 GGAAGGAGCTGGAAACATGAAAAACAACCTGCCCATCATCGCGCTTGA    936


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