Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02564 and RBAM_015400
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:23
# Commandline: needle
# -asequence dna-align/BSNT_02564___cysH.1.9828.seq
# -bsequence dna-align/RBAM_015400___cysH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02564___cysH-RBAM_015400___cysH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02564___cysH-RBAM_015400___cysH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02564___cysH
# 2: RBAM_015400___cysH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 704
# Identity: 571/704 (81.1%)
# Similarity: 571/704 (81.1%)
# Gaps: 4/704 ( 0.6%)
# Score: 2299.0
#
#
#=======================================
BSNT_02564___ 1 ATGTTAACGTATGATAATTGGGAAGAACCAACGATTACATTTCCGGAAGA 50
|||.||||||||||.|..||||||||.||..|||||||||||||||||||
RBAM_015400__ 1 ATGCTAACGTATGACACATGGGAAGAGCCGGCGATTACATTTCCGGAAGA 50
BSNT_02564___ 51 CGATCCTTATAAAGGAGCGCTGTCAGTTTTAAAATGGGCATACGGCCATT 100
||||.|.||||||||.||||||||.|||||||||||||||||||||||.|
RBAM_015400__ 51 CGATTCCTATAAAGGCGCGCTGTCCGTTTTAAAATGGGCATACGGCCACT 100
BSNT_02564___ 101 ACGGCAATCAACTTGTTTATGCCTGCAGTTTCGGAATTGAGGGAATCGTT 150
||||..|.||.||||||||.||.|||||.|||||.|||||.||.|||||.
RBAM_015400__ 101 ACGGAGACCAGCTTGTTTACGCGTGCAGCTTCGGGATTGAAGGCATCGTC 150
BSNT_02564___ 151 CTGATTGACTTAATTTATAAAGTGAAAAAAGACGCAGAGATTGTGTTTCT 200
|||||.||.|||||||.||||||.||.|||||.||.||.||.||||||||
RBAM_015400__ 151 CTGATCGATTTAATTTCTAAAGTAAAGAAAGATGCGGAAATCGTGTTTCT 200
BSNT_02564___ 201 TGATACAGGACTTCATTTTAAAGAAACCTATGAAACAATTGAACGAGTGA 250
.|||||.||.|||||.|||||||||||.||||||||.||.|||..|||||
RBAM_015400__ 201 CGATACGGGTCTTCACTTTAAAGAAACATATGAAACGATCGAAAAAGTGA 250
BSNT_02564___ 251 AAGAGCGTTATCCGGGTCTTAATATCATCCTGAAAAA-ACCAGACCTCAC 299
||||||||||.|||||.||.||.||.||||||||||| .|||| .||.||
RBAM_015400__ 251 AAGAGCGTTACCCGGGACTGAACATTATCCTGAAAAAGCCCAG-TCTTAC 299
BSNT_02564___ 300 CCTTGAGGAACAAGCCGAAGAACATGGTGACAAACTGTGGGAAAGAGAGC 349
.|||||.|||||.|||||.|..||.||.||.|||||||||||||||||.|
RBAM_015400__ 300 TCTTGAAGAACAGGCCGAGGCTCACGGAGATAAACTGTGGGAAAGAGAAC 349
BSNT_02564___ 350 CGAATCAGTGCTGCTATCTTAGAAAGGTCGTTCCTTTAAGAGAGGCGCTT 399
||||.|||||||||||..|.|||||..|..|.||.||||||||.|||||.
RBAM_015400__ 350 CGAACCAGTGCTGCTACATCAGAAAAATTCTGCCGTTAAGAGAAGCGCTC 399
BSNT_02564___ 400 TCAGGACATCCAGCCTGGCTTTCCGGCCTGCGTCGTGATCAAGGGCCAAG 449
.||||.|||||.||.|||||.||||||||.||.||.|||||||||||.||
RBAM_015400__ 400 GCAGGGCATCCGGCATGGCTGTCCGGCCTTCGCCGGGATCAAGGGCCGAG 449
BSNT_02564___ 450 CCGTGCCAATACGAATTTCTTAAACAAAGATGA-AAAATTCAAGTCAGTA 498
|||.||.||||||||||||.|.||.|||||.|| ||..||||| ||..|.
RBAM_015400__ 450 CCGGGCGAATACGAATTTCCTGAATAAAGACGACAAGTTTCAA-TCGATT 498
BSNT_02564___ 499 AAAGTTTGCCCGCTTATCCATTGGACTTGGAAAGACATTTGGAGATACAC 548
|||||.||||||||.|||||||||||.|||||||||||.||||||||.||
RBAM_015400__ 499 AAAGTATGCCCGCTGATCCATTGGACATGGAAAGACATCTGGAGATATAC 548
BSNT_02564___ 549 ATCCCGGAATGAACTGGACTACAATCCGCTTCATGACCAAGGATATCCAA 598
.|||..|.||||.|||||.||||||...||.|||||.||.||.|||||.|
RBAM_015400__ 549 TTCCAAGCATGAGCTGGATTACAATATCCTCCATGATCAGGGGTATCCGA 598
BSNT_02564___ 599 GTATTGGATGTGCGCCTTGCACTGCTCCCGCTTTTACAGCAGAGGATTTG 648
|.||.||.||||..||.||||||.|.||.||.|||||.||.||.||||||
RBAM_015400__ 599 GCATCGGCTGTGAACCGTGCACTTCACCTGCGTTTACCGCGGAAGATTTG 648
BSNT_02564___ 649 CGCTCAGGCAGATGGAATGGTATGGCGAAAACAGAATGCGGACTGCATGA 698
||....|||||||||||.||.|||||||||||||||||||||||||||||
RBAM_015400__ 649 CGGAGCGGCAGATGGAACGGCATGGCGAAAACAGAATGCGGACTGCATGA 698
BSNT_02564___ 699 ATAA 702
||||
RBAM_015400__ 699 ATAA 702
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