Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02569 and RBAM_015440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:23
# Commandline: needle
# -asequence dna-align/BSNT_02569___ylnD.1.9828.seq
# -bsequence dna-align/RBAM_015440___ylnD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02569___ylnD-RBAM_015440___ylnD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02569___ylnD-RBAM_015440___ylnD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02569___ylnD
# 2: RBAM_015440___ylnD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 777
# Identity: 616/777 (79.3%)
# Similarity: 616/777 (79.3%)
# Gaps: 6/777 ( 0.8%)
# Score: 2428.5
#
#
#=======================================
BSNT_02569___ 1 ATGGGGAAAGTATATATTGTAGGAGCGGGTCCTGGTGACCCTGATCTGCT 50
|||||||||||||.|||.||.|||||.|||||.||.||.||.||..|..|
RBAM_015440__ 1 ATGGGGAAAGTATTTATCGTTGGAGCCGGTCCGGGAGATCCGGACTTATT 50
BSNT_02569___ 51 GACAATTAAAGCGCTGAAAGCCATTGAAAAAGCTGATGTCATCTTATATG 100
.||..|.||.||..||||||||||..|.|||||.||.||.||.|||||||
RBAM_015440__ 51 AACGGTGAAGGCAATGAAAGCCATACAGAAAGCGGACGTTATATTATATG 100
BSNT_02569___ 101 ACAGATTAGTAAATAAAGAGATTTTACAATATGCCAAAGAGCAAGCAGAC 150
|||||||.||||..|||||||||||||||||||||..|||..||||.||.
RBAM_015440__ 101 ACAGATTGGTAAGCAAAGAGATTTTACAATATGCCGGAGAAGAAGCGGAT 150
BSNT_02569___ 151 CTGATCTACTGCGGGAAGCTTCCAGATTTTCATACGATGAAGCAGGAAAC 200
|||||.||||||||.|||||.||.||||||||.|..|||||.|||||.||
RBAM_015440__ 151 CTGATTTACTGCGGAAAGCTCCCGGATTTTCACATTATGAAACAGGATAC 200
BSNT_02569___ 201 CATCAATCGATTTCTTGTGAAGTATGCGCAAAAAGGGAAAATGGTTGTCA 250
.|||||.||.||.|||||||||||||||.||||.|||||||..|||||.|
RBAM_015440__ 201 GATCAACCGTTTCCTTGTGAAGTATGCGAAAAAGGGGAAAACCGTTGTAA 250
BSNT_02569___ 251 GACTGAAAGGCGGAGACCCTTTTGTGTTCGGCAGAGGAGGGGAAGAAGCG 300
|.||.||.||.||.|||||.|||||.||||||.|.|||||.|||||||||
RBAM_015440__ 251 GGCTCAAGGGAGGCGACCCGTTTGTTTTCGGCCGCGGAGGCGAAGAAGCG 300
BSNT_02569___ 301 GAATGCCTCTCTG---AAAATGGAATTCCGTTTGAAATCATCCCCGGCAT 347
|| |.||||| | ||||.|..|||||||||||.|||.|.||||||||
RBAM_015440__ 301 GA--GGCTCTC-GCACAAAACGCCATTCCGTTTGAGATCGTTCCCGGCAT 347
BSNT_02569___ 348 TACGTCTGGAATCGCGGCAGCCGCTTATGCCGGGATTCCTGTTACTCATC 397
|||.||.|||||||||||.||.|||||||||||.|||||.||.||.||..
RBAM_015440__ 348 TACATCAGGAATCGCGGCTGCTGCTTATGCCGGCATTCCCGTGACGCACA 397
BSNT_02569___ 398 GGGAGGCGGGCTCTAACGTCGCTTTTGTAACGGGTCATTATAAAAAAGAA 447
|.||||||.||||.||.|||||.||.||.|||||.|||||||||.|||||
RBAM_015440__ 398 GAGAGGCGAGCTCCAATGTCGCATTCGTTACGGGACATTATAAACAAGAA 447
BSNT_02569___ 448 GAAGATTTTGAGGAAAAGTGGAAAGCGCTGGCTACAGGAATTGATACACT 497
||.||.|||||.|||||.||||||||||||||.||.||.||||||||.||
RBAM_015440__ 448 GACGACTTTGAAGAAAAATGGAAAGCGCTGGCGACGGGCATTGATACGCT 497
BSNT_02569___ 498 TGTCATCTATATGGGTATCAAAAACGTGCAGCAGATTGAAAGAAAACTCC 547
.||.||.||||||||.||.|||||..|.|.||||||||||||||..||.|
RBAM_015440__ 498 GGTGATTTATATGGGAATTAAAAATATCCGGCAGATTGAAAGAATGCTGC 547
BSNT_02569___ 548 TTGAAAACGGCAGGGACGGTTCTACGCCGGCAGCCTTTATTCATTGGGGA 597
|.|||||||||||.||||.....||.||||||||||||||||||||||||
RBAM_015440__ 548 TGGAAAACGGCAGAGACGCCGGCACCCCGGCAGCCTTTATTCATTGGGGA 597
BSNT_02569___ 598 ACAACGGACAAGCAAAAATCTGTTTTTTGTACAGTTGAAACCCTTTCAGA 647
||.|||||||.|||||||.|.||..|.||.||.||.|..||.||||||||
RBAM_015440__ 598 ACGACGGACAGGCAAAAAACAGTCGTCTGCACCGTCGGCACGCTTTCAGA 647
BSNT_02569___ 648 AACGGTGATAAAAGAAAACATTACAAATCCGAGTTTAATTGTCATTGGAA 697
.||.||||||||||||.|.||.|.|||.|||||.||||||||.||.||..
RBAM_015440__ 648 CACAGTGATAAAAGAAGAAATCAAAAACCCGAGCTTAATTGTTATCGGCG 697
BSNT_02569___ 698 ATGTTGTAAATTATCACTATAAGCTGGAATGGTTTGAATCTGAACTGAAA 747
||||.||.||||||||||..||.|||||.||||.||.||||||||.||||
RBAM_015440__ 698 ATGTCGTCAATTATCACTGCAAACTGGACTGGTATGCATCTGAACAGAAA 747
BSNT_02569___ 748 AAACAAGATTTAAGCGAGGCGTTGTAA 774
||.|..|||||.|||||||||||||||
RBAM_015440__ 748 AATCTGGATTTGAGCGAGGCGTTGTAA 774
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